The 2.0 version of rSNPBase

Variant report

Variant rs7516153
Chromosome Location chr1:197541723-197541724
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197506800-197564600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:197508400-197602400 Weak transcription Left Ventricle heart
3 chr1:197526800-197563000 Weak transcription Osteobl bone
4 chr1:197529800-197548800 Weak transcription Right Ventricle heart
5 chr1:197535600-197542200 Weak transcription Small Intestine intestine
6 chr1:197537000-197574600 Weak transcription NHDF-Ad bronchial
7 chr1:197537200-197541800 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr1:197537200-197548600 Weak transcription Adipose Nuclei Adipose
9 chr1:197537400-197550400 Weak transcription Fetal Lung lung
10 chr1:197537400-197602200 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr1:197537800-197546000 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr1:197537800-197550400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:197537800-197585600 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr1:197538000-197546800 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:197538000-197554000 Weak transcription Colon Smooth Muscle Colon
16 chr1:197538200-197544400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:197538600-197563600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:197538800-197548600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr1:197539000-197543000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:197539000-197544200 Weak transcription Fetal Brain Female brain
21 chr1:197539000-197545400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:197539000-197545800 Weak transcription Primary T cells fromperipheralblood blood
23 chr1:197539000-197554400 Weak transcription Primary B cells from peripheral blood blood
24 chr1:197539000-197556600 Weak transcription Fetal Kidney kidney
25 chr1:197539200-197545200 Weak transcription Rectal Smooth Muscle rectum
26 chr1:197539600-197541800 Strong transcription Duodenum Smooth Muscle Duodenum
27 chr1:197539800-197543800 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr1:197540000-197544400 Weak transcription Placenta Amnion Placenta Amnion
29 chr1:197540000-197554600 Weak transcription Stomach Smooth Muscle stomach
30 chr1:197540200-197542000 Strong transcription Primary T cells from cord blood blood
31 chr1:197540200-197542000 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr1:197540200-197542000 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr1:197540200-197542600 Weak transcription Spleen Spleen
34 chr1:197540400-197542000 Strong transcription Liver Liver
35 chr1:197540600-197541800 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr1:197540600-197542000 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr1:197540600-197543000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:197540600-197545200 Weak transcription Dnd41 blood
39 chr1:197540800-197542000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr1:197540800-197542000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:197540800-197542800 Strong transcription Duodenum Mucosa Duodenum
42 chr1:197541000-197541800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
43 chr1:197541000-197542000 Strong transcription Fetal Intestine Large intestine
44 chr1:197541000-197542000 Strong transcription Fetal Intestine Small intestine
45 chr1:197541000-197542000 ZNF genes & repeats Lung lung
46 chr1:197541000-197542000 Strong transcription Pancreas Pancrea
47 chr1:197541200-197541800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:197541200-197541800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:197541200-197541800 Strong transcription Aorta Aorta
50 chr1:197541200-197541800 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015