The 2.0 version of rSNPBase

Variant report

Variant rs12066841
Chromosome Location chr1:197710246-197710247
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197695800-197722000 Weak transcription Fetal Lung lung
2 chr1:197695800-197732800 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:197695800-197742200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:197696000-197716000 Weak transcription Duodenum Mucosa Duodenum
5 chr1:197701800-197711800 Weak transcription Fetal Heart heart
6 chr1:197702000-197711600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:197702600-197714200 Weak transcription K562 blood
8 chr1:197702800-197713600 Weak transcription Primary B cells from peripheral blood blood
9 chr1:197702800-197713600 Weak transcription Primary hematopoietic stem cells blood
10 chr1:197702800-197743800 Weak transcription Esophagus oesophagus
11 chr1:197703000-197718400 Weak transcription Dnd41 blood
12 chr1:197705000-197711800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:197706200-197710600 Enhancers Primary T helper cells PMA-I stimulated --
14 chr1:197706600-197711600 Weak transcription Primary monocytes fromperipheralblood blood
15 chr1:197706600-197711800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr1:197706600-197729400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr1:197706800-197711600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:197706800-197741800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:197707600-197712600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:197708000-197716800 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr1:197708000-197722600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:197708200-197714400 Weak transcription Ovary ovary
23 chr1:197708400-197710400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:197708400-197711600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr1:197708400-197712800 Weak transcription Small Intestine intestine
26 chr1:197708400-197713600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:197708400-197714200 Weak transcription Right Atrium heart
28 chr1:197708400-197714400 Weak transcription Left Ventricle heart
29 chr1:197708400-197715200 Weak transcription Pancreas Pancrea
30 chr1:197708400-197716200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr1:197708400-197719200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:197708400-197719200 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:197708400-197721600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:197708400-197722800 Weak transcription Lung lung
35 chr1:197708400-197729800 Weak transcription NHEK skin
36 chr1:197708600-197719200 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr1:197709000-197711400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr1:197709200-197710600 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr1:197709200-197711800 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr1:197709400-197710600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:197709600-197710400 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr1:197709600-197711800 Weak transcription Primary T cells from cord blood blood
43 chr1:197709600-197712400 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr1:197709600-197716800 Weak transcription Psoas Muscle Psoas
45 chr1:197709800-197710600 Enhancers Liver Liver
46 chr1:197709800-197710600 Enhancers HepG2 liver
47 chr1:197709800-197718000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:197709800-197723000 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr1:197710200-197710400 Enhancers Primary T helper cells fromperipheralblood blood
50 chr1:197710200-197711800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015