Variant report

Variant rs6428416
Chromosome Location chr1:197701669-197701670
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197688000-197707400 Weak transcription Left Ventricle heart
2 chr1:197692800-197702600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr1:197694400-197705600 Weak transcription Osteobl bone
4 chr1:197694800-197707400 Weak transcription Psoas Muscle Psoas
5 chr1:197695800-197701800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr1:197695800-197702600 Weak transcription Liver Liver
7 chr1:197695800-197704600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:197695800-197704600 Weak transcription Fetal Intestine Small intestine
9 chr1:197695800-197704800 Weak transcription Primary B cells from cord blood blood
10 chr1:197695800-197705400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:197695800-197705600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:197695800-197706200 Weak transcription NHDF-Ad bronchial
13 chr1:197695800-197708000 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:197695800-197722000 Weak transcription Fetal Lung lung
15 chr1:197695800-197732800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:197695800-197742200 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:197696000-197702400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:197696000-197702800 Weak transcription H1 Cell Line embryonic stem cell
19 chr1:197696000-197705600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:197696000-197705800 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr1:197696000-197706000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr1:197696000-197709200 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:197696000-197716000 Weak transcription Duodenum Mucosa Duodenum
24 chr1:197697000-197709000 Weak transcription Primary T cells from cord blood blood
25 chr1:197698200-197705200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:197698800-197708000 Weak transcription Lung lung
27 chr1:197699200-197707800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr1:197700800-197702800 Strong transcription Primary hematopoietic stem cells blood
29 chr1:197700800-197703000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:197701000-197703000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr1:197701000-197708000 Weak transcription Small Intestine intestine
32 chr1:197701200-197703000 Strong transcription Dnd41 blood
33 chr1:197701400-197701800 Enhancers Fetal Heart heart
34 chr1:197701400-197702000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:197701400-197702600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:197701400-197702600 Enhancers K562 blood
37 chr1:197701400-197702800 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr1:197701600-197702200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:197701600-197705400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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