The 2.0 version of rSNPBase

Variant report

Variant rs7518180
Chromosome Location chr1:172583137-172583138
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172559000-172583400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:172566600-172595800 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr1:172570600-172584000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:172570600-172585400 Weak transcription Aorta Aorta
5 chr1:172576800-172585400 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:172579400-172585400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:172579600-172585200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:172579800-172588600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:172580000-172583800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:172580000-172584200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:172580000-172584400 Weak transcription HSMMtube muscle
12 chr1:172580000-172585400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr1:172580200-172585000 Weak transcription Duodenum Mucosa Duodenum
14 chr1:172580200-172589800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr1:172580400-172584000 Weak transcription Dnd41 blood
16 chr1:172580600-172583600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:172580600-172585400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:172580800-172583200 Weak transcription Fetal Thymus thymus
19 chr1:172580800-172583600 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr1:172580800-172583600 Weak transcription Adipose Nuclei Adipose
21 chr1:172580800-172583800 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr1:172580800-172583800 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr1:172580800-172585000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:172580800-172585400 Weak transcription Placenta Placenta
25 chr1:172580800-172588800 Weak transcription NH-A brain
26 chr1:172581000-172583400 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr1:172581000-172583600 Weak transcription Primary hematopoietic stem cells blood
28 chr1:172581000-172583800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:172581000-172583800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:172581000-172584000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:172581000-172584400 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr1:172581000-172585200 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr1:172581000-172585200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:172581000-172585600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:172581000-172585800 Weak transcription Placenta Amnion Placenta Amnion
36 chr1:172581000-172586400 Weak transcription Primary T cells from cord blood blood
37 chr1:172581000-172589400 Weak transcription Primary T cells fromperipheralblood blood
38 chr1:172581200-172583200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr1:172581200-172584000 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr1:172581200-172584000 Weak transcription Primary B cells from cord blood blood
41 chr1:172581200-172584000 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr1:172581200-172584400 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr1:172581200-172584400 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr1:172581200-172584600 Weak transcription Primary monocytes fromperipheralblood blood
45 chr1:172581600-172584200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:172582000-172584000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:172582000-172585200 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr1:172582000-172588600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr1:172582600-172585400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:172583000-172583200 Enhancers HepG2 liver

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Last update: Aug 31, 2015