Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:84871504..84874028-chr1:84877605..84880446,2	K562	blood:

Variant related genes	Relation type
ENSG00000137976	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10082140	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10082196	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10874447	1.00[YRI][hapmap];1.00[EUR][1000 genomes]
rs11164008	1.00[EUR][1000 genomes]
rs11808831	1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12057445	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12063628	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12063669	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1515142	0.83[YRI][hapmap];1.00[EUR][1000 genomes]
rs1533373	1.00[EUR][1000 genomes]
rs17131643	1.00[EUR][1000 genomes]
rs172736	1.00[EUR][1000 genomes]
rs2911608	1.00[EUR][1000 genomes]
rs312398	1.00[EUR][1000 genomes]
rs6671641	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72943947	1.00[EUR][1000 genomes]
rs7413066	0.83[YRI][hapmap];1.00[EUR][1000 genomes]
rs7529017	0.83[YRI][hapmap];1.00[EUR][1000 genomes]
rs7546355	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs784834	1.00[EUR][1000 genomes]
rs9804106	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830437	chr1:84837524-85001269	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84874000-84878200	Weak transcription	Psoas Muscle	Psoas
2	chr1:84874200-84878000	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr1:84874200-84878200	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr1:84874400-84878200	Weak transcription	Aorta	Aorta
5	chr1:84875600-84878200	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr1:84876400-84878000	Enhancers	Osteobl	bone
7	chr1:84876800-84878200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr1:84877000-84880200	Weak transcription	HUVEC	blood vessel
9	chr1:84877800-84878000	Enhancers	NH-A	brain
10	chr1:84877800-84878200	Enhancers	Sigmoid Colon	Sigmoid Colon

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