The 2.0 version of rSNPBase

Variant report

Variant rs753780
Chromosome Location chr11:121370716-121370717
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:121349800-121393000 Weak transcription Colonic Mucosa Colon
2 chr11:121350000-121401400 Weak transcription Fetal Brain Male brain
3 chr11:121350400-121393200 Weak transcription Gastric stomach
4 chr11:121351400-121384600 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr11:121352800-121377600 Strong transcription HepG2 liver
6 chr11:121353600-121377000 Weak transcription Pancreas Pancrea
7 chr11:121353800-121374200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr11:121359200-121384200 Weak transcription Fetal Stomach stomach
9 chr11:121359800-121377000 Weak transcription Esophagus oesophagus
10 chr11:121360800-121384400 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr11:121364000-121375800 Strong transcription Liver Liver
12 chr11:121365000-121371200 Strong transcription Fetal Intestine Large intestine
13 chr11:121365000-121371200 Strong transcription Fetal Intestine Small intestine
14 chr11:121365800-121371200 Weak transcription Fetal Muscle Leg muscle
15 chr11:121365800-121372200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr11:121365800-121374000 Strong transcription iPS-20b Cell Line embryonic stem cell
17 chr11:121365800-121374600 Strong transcription Dnd41 blood
18 chr11:121365800-121377200 Weak transcription Small Intestine intestine
19 chr11:121365800-121392600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr11:121366000-121373600 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr11:121366000-121374200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr11:121366000-121374600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr11:121366200-121372800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr11:121366200-121373200 Strong transcription Primary monocytes fromperipheralblood blood
25 chr11:121366200-121373400 Strong transcription Fetal Thymus thymus
26 chr11:121366200-121373600 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr11:121366400-121371200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr11:121366400-121375200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr11:121366400-121376400 Strong transcription Primary T regulatory cells fromperipheralblood blood
30 chr11:121366600-121371600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr11:121366600-121372800 Strong transcription Primary hematopoietic stem cells blood
32 chr11:121366800-121371400 Strong transcription H9 Cell Line embryonic stem cell
33 chr11:121366800-121371600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
34 chr11:121366800-121371800 Strong transcription Duodenum Mucosa Duodenum
35 chr11:121366800-121372800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr11:121366800-121373800 Strong transcription Primary neutrophils fromperipheralblood blood
37 chr11:121366800-121374600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr11:121367000-121372800 Strong transcription Primary T helper naive cells fromperipheralblood blood
39 chr11:121367200-121373600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr11:121367200-121376600 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr11:121367400-121371800 Strong transcription H1 Cell Line embryonic stem cell
42 chr11:121367400-121373800 Strong transcription Primary T cells from cord blood blood
43 chr11:121367600-121371200 Strong transcription Thymus Thymus
44 chr11:121367800-121374400 Strong transcription HUES64 Cell Line embryonic stem cell
45 chr11:121368000-121375800 Strong transcription Primary T cells fromperipheralblood blood
46 chr11:121368000-121378800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr11:121368400-121371600 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr11:121368400-121372600 Strong transcription iPS-18 Cell Line embryonic stem cell
49 chr11:121368400-121395800 Weak transcription Fetal Kidney kidney
50 chr11:121368600-121377000 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015