The 2.0 version of rSNPBase

Variant report

Variant rs7541615
Chromosome Location chr1:168889986-168889987
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:168879200-168890400 Weak transcription Aorta Aorta
2 chr1:168886200-168890600 Enhancers HMEC breast
3 chr1:168886800-168890200 Enhancers Brain Inferior Temporal Lobe brain
4 chr1:168886800-168890400 Enhancers ES-I3 Cell Line embryonic stem cell
5 chr1:168887200-168891400 Enhancers Adipose Nuclei Adipose
6 chr1:168887800-168890400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:168887800-168891800 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr1:168887800-168893400 Enhancers HepG2 liver
9 chr1:168888000-168891800 Enhancers Stomach Mucosa stomach
10 chr1:168888600-168890400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:168888800-168891000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:168889000-168892400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:168889000-168892600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr1:168889200-168890400 Enhancers Hela-S3 cervix
15 chr1:168889200-168891000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:168889200-168891600 Enhancers Fetal Intestine Small intestine
17 chr1:168889200-168891600 Enhancers Fetal Stomach stomach
18 chr1:168889200-168891800 Enhancers Fetal Lung lung
19 chr1:168889200-168891800 Enhancers Pancreas Pancrea
20 chr1:168889200-168891800 Enhancers Right Atrium heart
21 chr1:168889400-168890000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr1:168889400-168890400 Enhancers Muscle Satellite Cultured Cells --
23 chr1:168889400-168890600 Flanking Active TSS A549 lung
24 chr1:168889400-168891000 Enhancers NHLF lung
25 chr1:168889400-168891800 Enhancers Fetal Kidney kidney
26 chr1:168889400-168892600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:168889600-168890200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:168889600-168891200 Weak transcription Gastric stomach
29 chr1:168889600-168891400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:168889600-168891400 Weak transcription Left Ventricle heart
31 chr1:168889600-168891600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:168889800-168890000 Enhancers Psoas Muscle Psoas
33 chr1:168889800-168890200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:168889800-168890600 Flanking Active TSS HUVEC blood vessel

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Last update: Aug 31, 2015