Variant report

Variant	rs7542081
Chromosome Location	chr1:67703253-67703254
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10889675	0.89[ASN][1000 genomes]
rs11581483	0.91[ASN][1000 genomes]
rs11586253	0.83[ASN][1000 genomes]
rs12041187	0.97[ASN][1000 genomes]
rs12406837	0.82[ASN][1000 genomes]
rs4655531	0.89[ASN][1000 genomes]
rs56669261	0.91[ASN][1000 genomes]
rs56996373	0.83[ASN][1000 genomes]
rs59033475	0.88[ASN][1000 genomes]
rs6588251	0.97[ASN][1000 genomes]
rs6693831	0.96[ASN][1000 genomes]
rs72929019	0.91[ASN][1000 genomes]
rs7527919	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1243	chr1:67700289-67745337	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:67702000-67703800	Strong transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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