Variant report

Variant rs7546811
Chromosome Location chr1:151792842-151792843
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151778600-151802400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:151780000-151793400 Weak transcription Stomach Mucosa stomach
3 chr1:151784800-151794600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr1:151784800-151794800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:151786600-151793600 Enhancers Primary T helper cells PMA-I stimulated --
6 chr1:151786800-151793600 Enhancers Primary T helper cells fromperipheralblood blood
7 chr1:151786800-151795000 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr1:151787400-151800000 Weak transcription Spleen Spleen
9 chr1:151788200-151793200 Transcr. at gene 5' and 3' Thymus Thymus
10 chr1:151788200-151796800 Transcr. at gene 5' and 3' Fetal Thymus thymus
11 chr1:151789000-151793000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr1:151789400-151794400 Enhancers Primary T cells fromperipheralblood blood
13 chr1:151789400-151794600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:151789600-151793600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:151790000-151793200 Weak transcription Fetal Intestine Small intestine
16 chr1:151790000-151799000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
17 chr1:151790200-151793000 Weak transcription GM12878-XiMat blood
18 chr1:151790200-151793200 Weak transcription Fetal Intestine Large intestine
19 chr1:151790200-151801600 Weak transcription Right Atrium heart
20 chr1:151790600-151793800 Weak transcription Duodenum Mucosa Duodenum
21 chr1:151790600-151794200 Enhancers Skeletal Muscle Female skeletal muscle
22 chr1:151791000-151800600 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:151791600-151795600 Enhancers Liver Liver
24 chr1:151792000-151793600 Strong transcription Rectal Mucosa Donor 31 rectum
25 chr1:151792000-151793800 Enhancers Psoas Muscle Psoas
26 chr1:151792000-151794200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:151792000-151795000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:151792000-151796000 Flanking Active TSS Dnd41 blood
29 chr1:151792200-151793200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
30 chr1:151792200-151793200 Enhancers Esophagus oesophagus
31 chr1:151792200-151794400 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr1:151792200-151795000 Enhancers Primary T regulatory cells fromperipheralblood blood
33 chr1:151792200-151795400 Enhancers Primary hematopoietic stem cells blood
34 chr1:151792400-151793400 Enhancers NHEK skin
35 chr1:151792400-151793600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:151792400-151793800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:151792400-151793800 Enhancers Adipose Nuclei Adipose
38 chr1:151792400-151793800 Enhancers Right Ventricle heart
39 chr1:151792400-151793800 Flanking Active TSS Hela-S3 cervix
40 chr1:151792400-151794000 Enhancers HMEC breast
41 chr1:151792400-151794200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:151792400-151794400 Enhancers Skeletal Muscle Male skeletal muscle
43 chr1:151792400-151795200 Enhancers Primary T cells from cord blood blood
44 chr1:151792400-151795200 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr1:151792400-151795200 Enhancers Primary T helper naive cells from peripheral blood blood
46 chr1:151792600-151793000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:151792600-151793000 Bivalent Enhancer Fetal Muscle Trunk muscle
48 chr1:151792600-151793600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:151792600-151793800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr1:151792800-151793000 Enhancers Lung lung

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