Variant report

Variant rs12097336
Chromosome Location chr1:151785603-151785604
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151764200-151787000 Weak transcription Right Ventricle heart
2 chr1:151764200-151792800 Weak transcription Lung lung
3 chr1:151764600-151787600 Weak transcription Primary T cells from cord blood blood
4 chr1:151770800-151787200 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr1:151774600-151787000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:151776600-151787200 Weak transcription Spleen Spleen
7 chr1:151778400-151786000 Strong transcription Thymus Thymus
8 chr1:151778400-151792800 Weak transcription Left Ventricle heart
9 chr1:151778600-151792000 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr1:151778600-151802400 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr1:151778800-151789200 Weak transcription Fetal Intestine Small intestine
12 chr1:151779000-151787000 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:151780000-151793400 Weak transcription Stomach Mucosa stomach
14 chr1:151780200-151786800 Weak transcription Gastric stomach
15 chr1:151780800-151786600 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr1:151781000-151786000 Strong transcription Fetal Thymus thymus
17 chr1:151781800-151787600 Strong transcription Duodenum Mucosa Duodenum
18 chr1:151781800-151788400 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
19 chr1:151782000-151791000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:151782200-151789000 Weak transcription Esophagus oesophagus
21 chr1:151782600-151787000 Weak transcription H1 Cell Line embryonic stem cell
22 chr1:151782800-151786000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:151782800-151790400 Strong transcription Skeletal Muscle Male skeletal muscle
24 chr1:151783600-151790800 Strong transcription Pancreas Pancrea
25 chr1:151783600-151791400 Weak transcription Hela-S3 cervix
26 chr1:151783800-151788000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr1:151783800-151792000 Weak transcription Psoas Muscle Psoas
28 chr1:151784200-151787400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr1:151784200-151789400 Strong transcription Liver Liver
30 chr1:151784400-151787000 Weak transcription Fetal Muscle Leg muscle
31 chr1:151784400-151789800 Strong transcription Skeletal Muscle Female skeletal muscle
32 chr1:151784800-151794600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
33 chr1:151784800-151794800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
34 chr1:151785200-151785800 Enhancers Primary Natural Killer cells fromperipheralblood blood
35 chr1:151785400-151787800 Enhancers Primary T cells fromperipheralblood blood
36 chr1:151785400-151788200 Strong transcription Dnd41 blood
37 chr1:151785600-151786800 Weak transcription Primary T helper cells fromperipheralblood blood

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