The 2.0 version of rSNPBase

Variant report

Variant rs12079888
Chromosome Location chr1:151608723-151608724
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151586400-151610200 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr1:151586400-151610400 Weak transcription Left Ventricle heart
3 chr1:151586400-151611400 Weak transcription Esophagus oesophagus
4 chr1:151586400-151622200 Weak transcription Fetal Thymus thymus
5 chr1:151586400-151626600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:151587600-151640600 Weak transcription Fetal Brain Male brain
7 chr1:151588000-151626600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:151588200-151620600 Weak transcription Brain Germinal Matrix brain
9 chr1:151588200-151665200 Weak transcription Aorta Aorta
10 chr1:151588600-151611400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr1:151588600-151611400 Weak transcription Primary T cells fromperipheralblood blood
12 chr1:151589000-151617600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:151589000-151620600 Weak transcription Primary B cells from peripheral blood blood
14 chr1:151589600-151613200 Weak transcription Dnd41 blood
15 chr1:151591000-151630800 Weak transcription Fetal Kidney kidney
16 chr1:151591200-151675400 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr1:151592000-151609800 Weak transcription Fetal Muscle Trunk muscle
18 chr1:151592000-151611400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:151592000-151622600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr1:151592200-151609800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:151592400-151611400 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr1:151592600-151609800 Weak transcription NH-A brain
23 chr1:151592600-151610200 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr1:151592600-151611200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:151592600-151611200 Weak transcription Fetal Intestine Large intestine
26 chr1:151592600-151611800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:151592600-151613200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:151592600-151613600 Weak transcription NHEK skin
29 chr1:151592600-151613800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:151592600-151633800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:151592800-151610000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:151592800-151610200 Weak transcription Duodenum Mucosa Duodenum
33 chr1:151592800-151630600 Weak transcription Hela-S3 cervix
34 chr1:151593000-151611400 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr1:151593600-151611200 Weak transcription Gastric stomach
36 chr1:151593600-151612600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr1:151594000-151610200 Weak transcription Brain Cingulate Gyrus brain
38 chr1:151594000-151610400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:151594000-151612400 Weak transcription HSMM muscle
40 chr1:151594000-151621000 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:151594000-151652800 Weak transcription Right Ventricle heart
42 chr1:151594200-151610000 Weak transcription Brain Anterior Caudate brain
43 chr1:151594200-151617400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:151594200-151620600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr1:151594600-151611400 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr1:151594600-151613200 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr1:151594800-151610600 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr1:151595000-151610000 Weak transcription HSMMtube muscle
49 chr1:151595000-151611600 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr1:151595200-151610000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015