Variant report

No data

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:151664863..151666214-chr1:151706833..151708161,20	MCF-7	breast:
2	chr1:151506897..151508009-chr1:151707195..151708125,3	MCF-7	breast:
3	chr1:151678027..151678884-chr1:151707284..151708098,3	MCF-7	breast:
4	chr1:151707202..151708163-chr1:151808657..151809536,5	MCF-7	breast:
5	chr1:151510750..151514940-chr1:151703475..151709245,7	MCF-7	breast:
6	chr1:151694033..151697219-chr1:151705160..151709175,3	MCF-7	breast:
7	chr1:151566273..151567264-chr1:151706982..151708132,6	MCF-7	breast:
8	chr1:151665154..151666195-chr1:151707215..151708114,3	K562	blood:
9	chr1:151512093..151515440-chr1:151705130..151708821,4	MCF-7	breast:
10	chr1:151431956..151432631-chr1:151707245..151708154,2	K562	blood:
11	chr1:151416011..151416974-chr1:151707307..151708154,3	K562	blood:
12	chr1:151707320..151708173-chr1:151808673..151809435,3	MCF-7	breast:
13	chr1:151664791..151666370-chr1:151707222..151708158,5	MCF-7	breast:
14	chr1:151566513..151567202-chr1:151707541..151708055,2	MCF-7	breast:

No data

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11204851	1.00[YRI][hapmap]
rs11204855	1.00[YRI][hapmap]
rs11204863	0.90[AFR][1000 genomes]
rs11204875	1.00[AFR][1000 genomes]
rs11204883	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes]
rs11204889	0.82[AFR][1000 genomes]
rs12065239	1.00[YRI][hapmap]
rs12066062	0.91[LWK][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs12067532	1.00[LWK][hapmap]
rs12069509	1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs12071974	1.00[LWK][hapmap]
rs12071996	1.00[YRI][hapmap]
rs12072152	0.92[AFR][1000 genomes]
rs12077740	1.00[ASW][hapmap];0.91[LWK][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs12079888	1.00[ASW][hapmap];0.91[LWK][hapmap];1.00[YRI][hapmap]
rs12090093	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs12091920	1.00[ASW][hapmap];0.91[LWK][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs12092024	0.89[AFR][1000 genomes]
rs12097336	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs2008633	1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs4308981	1.00[LWK][hapmap];0.80[YRI][hapmap]
rs57983158	0.89[AFR][1000 genomes]
rs6658837	0.90[AFR][1000 genomes]
rs6685811	1.00[YRI][hapmap]
rs6686178	0.88[YRI][hapmap]
rs6701792	1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs7540761	1.00[YRI][hapmap]
rs7546811	0.85[AFR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:151700800-151709800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:151702200-151709800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr1:151702600-151709600	Weak transcription	Right Atrium	heart
4	chr1:151702800-151712200	Weak transcription	Stomach Mucosa	stomach
5	chr1:151707200-151708000	Enhancers	A549	lung
6	chr1:151707400-151708000	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr1:151707400-151708000	Enhancers	Hela-S3	cervix
8	chr1:151707600-151708000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr1:151707600-151708000	Enhancers	Placenta Amnion	Placenta Amnion
10	chr1:151707600-151709800	Weak transcription	Liver	Liver
11	chr1:151707800-151709400	Weak transcription	Fetal Intestine Small	intestine
12	chr1:151707800-151710200	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr1:151707800-151712200	Weak transcription	Pancreas	Pancrea

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