Variant report

Variant rs7550664
Chromosome Location chr1:154528709-154528710
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:154520600-154528800 Strong transcription iPS-20b Cell Line embryonic stem cell
2 chr1:154520600-154528800 Strong transcription Primary T cells from cord blood blood
3 chr1:154520800-154528800 Strong transcription Primary neutrophils fromperipheralblood blood
4 chr1:154521200-154528800 Strong transcription Primary T regulatory cells fromperipheralblood blood
5 chr1:154521200-154528800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr1:154521200-154528800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:154521400-154528800 Strong transcription Thymus Thymus
8 chr1:154521400-154529000 Strong transcription Rectal Mucosa Donor 29 rectum
9 chr1:154521600-154529000 Strong transcription Primary monocytes fromperipheralblood blood
10 chr1:154521800-154528800 Strong transcription Fetal Intestine Large intestine
11 chr1:154521800-154528800 Strong transcription Rectal Mucosa Donor 31 rectum
12 chr1:154521800-154528800 Strong transcription Sigmoid Colon Sigmoid Colon
13 chr1:154521800-154528800 Strong transcription K562 blood
14 chr1:154521800-154529000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:154522400-154528800 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr1:154523800-154529000 Strong transcription Colonic Mucosa Colon
17 chr1:154526600-154529000 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr1:154527200-154529000 Genic enhancers Primary T helper cells fromperipheralblood blood
19 chr1:154527800-154528800 Genic enhancers Primary T cells fromperipheralblood blood
20 chr1:154527800-154528800 Genic enhancers Dnd41 blood
21 chr1:154528000-154528800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr1:154528000-154528800 Weak transcription Brain Substantia Nigra brain
23 chr1:154528000-154529000 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr1:154528200-154528800 Weak transcription Brain Angular Gyrus brain
25 chr1:154528200-154528800 Weak transcription Fetal Brain Male brain
26 chr1:154528200-154529000 Weak transcription H9 Cell Line embryonic stem cell
27 chr1:154528200-154529000 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:154528200-154529000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr1:154528200-154529000 Genic enhancers Primary T helper cells PMA-I stimulated --
30 chr1:154528200-154529000 Genic enhancers Fetal Muscle Trunk muscle
31 chr1:154528200-154529200 Genic enhancers Placenta Placenta
32 chr1:154528200-154529200 Genic enhancers Spleen Spleen
33 chr1:154528200-154529600 Genic enhancers Lung lung
34 chr1:154528400-154528800 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr1:154528400-154528800 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr1:154528400-154528800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
37 chr1:154528400-154528800 Weak transcription Primary B cells from cord blood blood
38 chr1:154528400-154528800 Weak transcription Primary hematopoietic stem cells blood
39 chr1:154528400-154528800 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr1:154528400-154528800 Genic enhancers Primary T helper naive cells fromperipheralblood blood
41 chr1:154528400-154528800 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr1:154528400-154528800 Genic enhancers Cortex derived primary cultured neurospheres brain
43 chr1:154528400-154528800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:154528400-154528800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:154528400-154528800 Weak transcription Adipose Nuclei Adipose
46 chr1:154528400-154528800 Weak transcription Aorta Aorta
47 chr1:154528400-154528800 Weak transcription Liver Liver
48 chr1:154528400-154528800 Weak transcription Brain Anterior Caudate brain
49 chr1:154528400-154528800 Weak transcription Brain Hippocampus Middle brain
50 chr1:154528400-154528800 Weak transcription Duodenum Smooth Muscle Duodenum

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