Variant report

Variant	rs7552147
Chromosome Location	chr1:220690988-220690989
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs17007839	1.00[ASN][1000 genomes]
rs17007842	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6668644	1.00[AMR][1000 genomes]
rs6669644	1.00[AMR][1000 genomes]
rs6695068	1.00[ASN][1000 genomes]
rs6696723	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73093505	1.00[AMR][1000 genomes]
rs73093521	1.00[AMR][1000 genomes]
rs73093530	1.00[AMR][1000 genomes]
rs73101842	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73101870	1.00[AMR][1000 genomes]
rs7512507	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7518883	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7518985	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7531134	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7545089	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7550069	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7556342	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220687200-220691000	Enhancers	HMEC	breast
2	chr1:220687400-220691000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:220690200-220691600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr1:220690400-220691000	Enhancers	NHEK	skin
5	chr1:220690400-220691200	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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