Variant report

Variant	rs7558478
Chromosome Location	chr2:21188180-21188181
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10495715	0.86[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12713558	1.00[ASW][hapmap];0.93[MKK][hapmap];0.90[YRI][hapmap]
rs12720792	1.00[ASW][hapmap];0.90[MKK][hapmap]
rs12720847	1.00[ASW][hapmap];0.93[MKK][hapmap];0.90[YRI][hapmap]
rs17041644	0.85[AFR][1000 genomes]
rs17041647	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17041656	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17041676	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17041688	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17041694	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4665645	0.86[AMR][1000 genomes]
rs73918013	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21181000-21191400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:21186000-21188800	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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