Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10165914	0.86[ASN][1000 genomes]
rs10178968	0.86[ASN][1000 genomes]
rs10184617	0.83[ASN][1000 genomes]
rs10197478	0.86[ASN][1000 genomes]
rs10206802	0.86[ASN][1000 genomes]
rs1051386	0.90[CEU][hapmap];0.92[JPT][hapmap]
rs11127049	0.84[ASN][1000 genomes]
rs11547281	0.89[CEU][hapmap]
rs12477737	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12613610	0.80[CHB][hapmap]
rs12988718	0.91[ASN][1000 genomes]
rs13004867	1.00[CEU][hapmap]
rs13407663	0.86[ASN][1000 genomes]
rs1370452	0.86[ASN][1000 genomes]
rs2138397	0.90[CHB][hapmap];0.85[ASN][1000 genomes]
rs2944254	0.92[JPT][hapmap]
rs3020729	0.90[CEU][hapmap];0.92[JPT][hapmap]
rs34353387	1.00[CEU][hapmap]
rs34933869	0.87[EUR][1000 genomes]
rs35129240	0.85[EUR][1000 genomes]
rs35594332	1.00[CEU][hapmap]
rs35815787	0.85[EUR][1000 genomes]
rs36100635	0.90[CHB][hapmap];0.91[ASN][1000 genomes]
rs4832048	0.81[ASN][1000 genomes]
rs59818518	0.81[ASN][1000 genomes]
rs6547701	0.86[ASN][1000 genomes]
rs6711700	0.80[ASN][1000 genomes]
rs72934456	0.86[ASN][1000 genomes]
rs72934463	0.84[ASN][1000 genomes]
rs72934466	0.86[ASN][1000 genomes]
rs7564251	0.86[ASN][1000 genomes]
rs9808243	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532724	chr2:86622295-87086407	Weak transcription Active TSS Genic enhancers Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86922000-86923800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr2:86922200-86923200	ZNF genes & repeats	Primary hematopoietic stem cells	blood
3	chr2:86923000-86923200	ZNF genes & repeats	A549	lung

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