Variant report

Variant	rs7596893
Chromosome Location	chr2:73692187-73692188
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11884059	1.00[AMR][1000 genomes]
rs11884321	1.00[AMR][1000 genomes]
rs11888874	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11889925	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11891452	1.00[AMR][1000 genomes]
rs11893492	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11893870	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11895422	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11895770	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11898196	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11899128	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11899368	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11899455	1.00[AMR][1000 genomes]
rs11899542	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11900923	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11902529	1.00[AMR][1000 genomes]
rs1916106	1.00[AMR][1000 genomes]
rs34384696	1.00[AMR][1000 genomes]
rs35356857	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56947864	1.00[AMR][1000 genomes]
rs6726794	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6740441	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:73676200-73719400	Weak transcription	Colon Smooth Muscle	Colon
2	chr2:73676800-73706400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr2:73677000-73698000	Weak transcription	Hela-S3	cervix
4	chr2:73677000-73714200	Weak transcription	Pancreas	Pancrea
5	chr2:73678000-73706800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr2:73679200-73697000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr2:73679800-73692600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr2:73680200-73706400	Weak transcription	Brain Hippocampus Middle	brain
9	chr2:73680200-73714200	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr2:73681600-73706800	Weak transcription	HSMM	muscle
11	chr2:73683000-73706400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr2:73687000-73706200	Weak transcription	Primary T cells from cord blood	blood
13	chr2:73687000-73706400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr2:73687400-73697400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr2:73687800-73700600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr2:73688000-73714200	Weak transcription	Ovary	ovary
17	chr2:73688600-73706200	Weak transcription	Fetal Lung	lung

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links