Variant report

Variant	rs7614693
Chromosome Location	chr3:143636637-143636638
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10513236	1.00[ASN][1000 genomes]
rs11915876	1.00[ASN][1000 genomes]
rs11929030	1.00[ASN][1000 genomes]
rs55766595	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55848985	1.00[ASN][1000 genomes]
rs55850911	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56087620	1.00[ASN][1000 genomes]
rs56153797	1.00[ASN][1000 genomes]
rs56203852	1.00[ASN][1000 genomes]
rs57585973	1.00[ASN][1000 genomes]
rs73874107	1.00[ASN][1000 genomes]
rs73874108	1.00[ASN][1000 genomes]
rs73874109	1.00[ASN][1000 genomes]
rs7616037	1.00[ASN][1000 genomes]
rs7622738	1.00[ASN][1000 genomes]
rs7650841	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877568	chr3:143621140-143992630	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:143629800-143640400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links