Variant report

Variant	rs7627583
Chromosome Location	chr3:18086051-18086052
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs2203242	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs34590963	0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4130063	0.96[ASN][1000 genomes]
rs4132218	0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4688898	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4688899	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4688913	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6790525	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7645289	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9809015	0.93[ASN][1000 genomes]
rs9846000	0.96[ASN][1000 genomes]
rs9857811	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9859212	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9861146	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:18055000-18088000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr3:18082800-18088000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr3:18084200-18086200	Enhancers	Colon Smooth Muscle	Colon
4	chr3:18086000-18092800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr3:18086000-18096000	Weak transcription	HUES64 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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