The 2.0 version of rSNPBase

Variant report

Variant rs7630198
Chromosome Location chr3:100212511-100212512
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100210400-100212600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr3:100210400-100212600 Active TSS Brain Anterior Caudate brain
3 chr3:100210600-100212800 Active TSS HSMM muscle
4 chr3:100210800-100212600 Active TSS Placenta Amnion Placenta Amnion
5 chr3:100210800-100212800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr3:100211000-100212600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
7 chr3:100211000-100212600 Active TSS Liver Liver
8 chr3:100211000-100212600 Active TSS HMEC breast
9 chr3:100211000-100214000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr3:100211200-100212800 Active TSS HepG2 liver
11 chr3:100211400-100212800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
12 chr3:100211800-100212600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr3:100211800-100213600 Weak transcription Spleen Spleen
14 chr3:100211800-100213800 Weak transcription Lung lung
15 chr3:100212000-100212600 Enhancers Primary B cells from peripheral blood blood
16 chr3:100212000-100212800 Bivalent Enhancer Primary B cells from cord blood blood
17 chr3:100212000-100212800 Enhancers Primary T helper cells PMA-I stimulated --
18 chr3:100212000-100212800 Enhancers Primary Natural Killer cells fromperipheralblood blood
19 chr3:100212000-100212800 Enhancers Primary mononuclear cells fromperipheralblood Blood
20 chr3:100212000-100212800 Enhancers Rectal Mucosa Donor 31 rectum
21 chr3:100212000-100213200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr3:100212000-100215400 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr3:100212000-100215800 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr3:100212200-100212600 Enhancers Primary T cells from cord blood blood
25 chr3:100212200-100212600 Flanking Active TSS Fetal Lung lung
26 chr3:100212200-100212800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr3:100212200-100212800 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr3:100212200-100215600 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr3:100212400-100212600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr3:100212400-100212600 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr3:100212400-100212600 Enhancers Osteobl bone
32 chr3:100212400-100212800 Enhancers Fetal Muscle Leg muscle
33 chr3:100212400-100213000 Enhancers Fetal Muscle Trunk muscle
34 chr3:100212400-100213000 Weak transcription GM12878-XiMat blood
35 chr3:100212400-100213200 Enhancers Muscle Satellite Cultured Cells --
36 chr3:100212400-100213200 Enhancers Fetal Stomach stomach
37 chr3:100212400-100214000 Weak transcription Duodenum Mucosa Duodenum
38 chr3:100212400-100214400 Weak transcription NHDF-Ad bronchial
39 chr3:100212400-100214800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr3:100212400-100214800 Weak transcription NHEK skin
41 chr3:100212400-100215200 Weak transcription HSMMtube muscle
42 chr3:100212400-100215200 Weak transcription NH-A brain
43 chr3:100212400-100215200 Weak transcription NHLF lung
44 chr3:100212400-100215400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr3:100212400-100215600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr3:100212400-100219200 Weak transcription Aorta Aorta
47 chr3:100212400-100222800 Weak transcription Ovary ovary

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Last update: Aug 31, 2015