The 2.0 version of rSNPBase

Variant report

Variant rs62276521
Chromosome Location chr3:100213169-100213170
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100211000-100214000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr3:100211800-100213600 Weak transcription Spleen Spleen
3 chr3:100211800-100213800 Weak transcription Lung lung
4 chr3:100212000-100213200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr3:100212000-100215400 Weak transcription Primary hematopoietic stem cells short term culture blood
6 chr3:100212000-100215800 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr3:100212200-100215600 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr3:100212400-100213200 Enhancers Muscle Satellite Cultured Cells --
9 chr3:100212400-100213200 Enhancers Fetal Stomach stomach
10 chr3:100212400-100214000 Weak transcription Duodenum Mucosa Duodenum
11 chr3:100212400-100214400 Weak transcription NHDF-Ad bronchial
12 chr3:100212400-100214800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr3:100212400-100214800 Weak transcription NHEK skin
14 chr3:100212400-100215200 Weak transcription HSMMtube muscle
15 chr3:100212400-100215200 Weak transcription NH-A brain
16 chr3:100212400-100215200 Weak transcription NHLF lung
17 chr3:100212400-100215400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr3:100212400-100215600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr3:100212400-100219200 Weak transcription Aorta Aorta
20 chr3:100212400-100222800 Weak transcription Ovary ovary
21 chr3:100212600-100213600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr3:100212600-100213600 Weak transcription Brain Anterior Caudate brain
23 chr3:100212600-100214800 Weak transcription HMEC breast
24 chr3:100212600-100215200 Weak transcription Osteobl bone
25 chr3:100212600-100215400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr3:100212800-100213200 Active TSS Liver Liver
27 chr3:100212800-100213600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr3:100212800-100213600 Weak transcription HepG2 liver
29 chr3:100212800-100214400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr3:100212800-100214800 Weak transcription HSMM muscle
31 chr3:100212800-100215200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr3:100212800-100217800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:100212800-100224800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr3:100213000-100213400 Weak transcription Fetal Lung lung
35 chr3:100213000-100213400 Weak transcription Placenta Amnion Placenta Amnion
36 chr3:100213000-100213600 Enhancers GM12878-XiMat blood

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Last update: Aug 31, 2015