Variant report

Variant	rs7632406
Chromosome Location	chr3:34682935-34682936
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10510660	0.88[ASN][1000 genomes]
rs10865859	0.82[ASN][1000 genomes]
rs1117173	0.81[ASN][1000 genomes]
rs1117663	0.80[ASN][1000 genomes]
rs11525737	0.82[ASN][1000 genomes]
rs11525738	0.80[ASN][1000 genomes]
rs11705846	0.80[ASN][1000 genomes]
rs12233438	0.82[ASN][1000 genomes]
rs12486760	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12487200	0.82[ASN][1000 genomes]
rs12492940	0.82[ASN][1000 genomes]
rs12636214	0.82[ASN][1000 genomes]
rs13058934	0.82[ASN][1000 genomes]
rs13059811	0.80[ASN][1000 genomes]
rs13060690	0.80[ASN][1000 genomes]
rs13066312	0.82[ASN][1000 genomes]
rs13066328	0.82[ASN][1000 genomes]
rs13072842	0.80[ASN][1000 genomes]
rs13080033	0.96[ASN][1000 genomes]
rs13080219	0.96[ASN][1000 genomes]
rs13082790	0.86[ASN][1000 genomes]
rs13085801	0.96[ASN][1000 genomes]
rs1520632	0.80[ASN][1000 genomes]
rs1520645	0.80[ASN][1000 genomes]
rs1607771	0.80[ASN][1000 genomes]
rs1990672	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2080424	0.80[ASN][1000 genomes]
rs2193080	0.80[ASN][1000 genomes]
rs2358501	0.82[ASN][1000 genomes]
rs35241516	0.80[ASN][1000 genomes]
rs4467396	0.80[ASN][1000 genomes]
rs60107689	0.80[ASN][1000 genomes]
rs6550286	0.80[ASN][1000 genomes]
rs66511672	0.82[ASN][1000 genomes]
rs6762310	0.80[ASN][1000 genomes]
rs6764675	0.82[ASN][1000 genomes]
rs6766288	0.80[ASN][1000 genomes]
rs6779356	0.82[ASN][1000 genomes]
rs6799746	0.80[ASN][1000 genomes]
rs7624543	0.82[ASN][1000 genomes]
rs7624853	0.82[ASN][1000 genomes]
rs7637897	0.80[ASN][1000 genomes]
rs7639229	0.87[ASN][1000 genomes]
rs7639870	0.82[ASN][1000 genomes]
rs7650207	0.82[ASN][1000 genomes]
rs918086	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9809734	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1820420	chr3:34662157-34708263	Enhancers Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34682000-34683600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr3:34682000-34683800	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr3:34682600-34683600	Enhancers	ES-I3 Cell Line	embryonic stem cell

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