The 2.0 version of rSNPBase

Variant report

Variant rs7645941
Chromosome Location chr3:56714423-56714424
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56675800-56716200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:56684400-56715200 Weak transcription Fetal Heart heart
3 chr3:56695400-56716000 Weak transcription Fetal Brain Male brain
4 chr3:56695600-56715600 Weak transcription Stomach Mucosa stomach
5 chr3:56699600-56716000 Weak transcription Fetal Kidney kidney
6 chr3:56699600-56716200 Weak transcription Spleen Spleen
7 chr3:56699800-56716000 Weak transcription Aorta Aorta
8 chr3:56701800-56716000 Weak transcription Psoas Muscle Psoas
9 chr3:56702400-56715400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr3:56702400-56716200 Weak transcription Small Intestine intestine
11 chr3:56702600-56715800 Weak transcription Stomach Smooth Muscle stomach
12 chr3:56702600-56716000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr3:56702600-56716000 Weak transcription Colonic Mucosa Colon
14 chr3:56702800-56715800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr3:56703000-56716200 Weak transcription Ovary ovary
16 chr3:56703200-56716000 Weak transcription Placenta Amnion Placenta Amnion
17 chr3:56703600-56715400 Weak transcription Brain Hippocampus Middle brain
18 chr3:56704800-56714800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr3:56704800-56714800 Weak transcription HMEC breast
20 chr3:56704800-56715600 Weak transcription HSMMtube muscle
21 chr3:56704800-56715800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr3:56704800-56716000 Weak transcription Brain Germinal Matrix brain
23 chr3:56704800-56716200 Weak transcription Left Ventricle heart
24 chr3:56705200-56715200 Weak transcription Thymus Thymus
25 chr3:56705200-56716000 Weak transcription Fetal Lung lung
26 chr3:56705200-56716000 Weak transcription Fetal Muscle Trunk muscle
27 chr3:56705200-56716200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr3:56705400-56715400 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr3:56705400-56716000 Weak transcription H9 Cell Line embryonic stem cell
30 chr3:56705400-56716000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr3:56705400-56716200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr3:56705400-56716200 Weak transcription Gastric stomach
33 chr3:56705800-56715400 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr3:56705800-56715400 Weak transcription Primary hematopoietic stem cells blood
35 chr3:56706200-56715800 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr3:56706800-56714600 Weak transcription NH-A brain
37 chr3:56707200-56714800 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr3:56707200-56715200 Weak transcription H1 Cell Line embryonic stem cell
39 chr3:56707200-56715400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr3:56707200-56716000 Weak transcription Fetal Intestine Large intestine
41 chr3:56707200-56716200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr3:56707200-56716200 Weak transcription Esophagus oesophagus
43 chr3:56707400-56714600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr3:56707400-56714800 Weak transcription Liver Liver
45 chr3:56707400-56714800 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr3:56707400-56714800 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr3:56707400-56715200 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr3:56707400-56715200 Weak transcription Rectal Smooth Muscle rectum
49 chr3:56707400-56715400 Weak transcription Brain Anterior Caudate brain
50 chr3:56707400-56716000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015