Variant report

Variant	rs7649718
Chromosome Location	chr3:43695977-43695978
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs4336089	0.89[AFR][1000 genomes]
rs6797061	1.00[AFR][1000 genomes]
rs6797141	1.00[AFR][1000 genomes]
rs6800061	1.00[CEU][hapmap]
rs6800391	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs7629524	1.00[AFR][1000 genomes]
rs7632220	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[AFR][1000 genomes]
rs9681141	1.00[CHB][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834673	chr3:43622985-43799876	Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:43691600-43700800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr3:43692000-43700200	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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