Variant report

Variant	rs7650600
Chromosome Location	chr3:70538766-70538767
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11128176	0.88[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs12490416	0.87[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs13096169	0.87[ASN][1000 genomes]
rs1491609	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17790790	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4491863	0.87[ASN][1000 genomes]
rs4572735	0.87[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs4638930	0.83[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs6549341	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6796357	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7431027	0.83[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs9849440	0.81[ASN][1000 genomes]
rs9871358	0.84[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:70536800-70539400	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr3:70537400-70539400	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr3:70538600-70538800	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr3:70538600-70539200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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