Variant report

Variant	rs7657863
Chromosome Location	chr4:149905182-149905183
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10014370	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10016677	0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1014727	0.80[AFR][1000 genomes]
rs11940147	1.00[ASN][1000 genomes]
rs11944377	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12508150	1.00[ASN][1000 genomes]
rs13108922	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17025307	1.00[ASN][1000 genomes]
rs17025566	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17025568	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17025674	1.00[ASN][1000 genomes]
rs17723371	1.00[ASN][1000 genomes]
rs2520488	0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2520489	0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2520493	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28823617	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2884516	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28858806	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3934944	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4370116	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4527455	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4835144	1.00[ASN][1000 genomes]
rs4835145	1.00[ASN][1000 genomes]
rs4835150	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4835552	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs524379	1.00[ASN][1000 genomes]
rs58110064	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59154095	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59945218	1.00[ASN][1000 genomes]
rs60745952	1.00[ASN][1000 genomes]
rs67450776	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72737803	1.00[ASN][1000 genomes]
rs72737810	1.00[ASN][1000 genomes]
rs72737822	1.00[ASN][1000 genomes]
rs72737827	1.00[ASN][1000 genomes]
rs72737863	1.00[ASN][1000 genomes]
rs73856290	1.00[ASN][1000 genomes]
rs73856302	1.00[ASN][1000 genomes]
rs996834	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9992084	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:149902000-149905200	Enhancers	Primary B cells from peripheral blood	blood
2	chr4:149902800-149908400	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr4:149903800-149908200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr4:149904600-149905600	Enhancers	Primary B cells from cord blood	blood
5	chr4:149904800-149905400	Enhancers	Stomach Mucosa	stomach
6	chr4:149904800-149907800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr4:149904800-149908000	Weak transcription	NHEK	skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links