Variant report

Variant	rs766312
Chromosome Location	chr2:125382660-125382661
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10178249	1.00[JPT][hapmap]
rs11123058	1.00[JPT][hapmap]
rs11902093	1.00[JPT][hapmap]
rs13002390	1.00[JPT][hapmap]
rs13020806	1.00[JPT][hapmap]
rs13407611	1.00[JPT][hapmap]
rs1454134	1.00[JPT][hapmap]
rs17320899	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17393557	1.00[JPT][hapmap]
rs17393704	1.00[JPT][hapmap]
rs1993272	1.00[JPT][hapmap]
rs1993273	1.00[JPT][hapmap]
rs6755119	1.00[JPT][hapmap]
rs7580383	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834357	chr2:125258157-125421507	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv528674	chr2:125346337-125383522	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
3	nsv834359	chr2:125367872-125536022	Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
4	nsv428727	chr2:125372897-125512949	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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