Variant report

Variant	rs13020806
Chromosome Location	chr2:125516421-125516422
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10178249	1.00[JPT][hapmap]
rs10445856	1.00[CHB][hapmap]
rs10445857	1.00[CHB][hapmap]
rs11123058	1.00[JPT][hapmap]
rs11888989	1.00[CHB][hapmap]
rs11899245	1.00[CHB][hapmap]
rs11902093	1.00[JPT][hapmap]
rs13002390	1.00[JPT][hapmap]
rs13407611	1.00[JPT][hapmap]
rs1454134	1.00[JPT][hapmap]
rs17320237	1.00[CHB][hapmap]
rs17320899	1.00[JPT][hapmap]
rs17392197	1.00[CHB][hapmap]
rs17393557	1.00[JPT][hapmap]
rs17393704	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1993272	1.00[JPT][hapmap]
rs1993273	1.00[JPT][hapmap]
rs6541961	1.00[CHB][hapmap]
rs6755119	1.00[JPT][hapmap]
rs7580383	1.00[JPT][hapmap]
rs766312	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834359	chr2:125367872-125536022	Weak transcription Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
2	nsv834360	chr2:125492685-125683200	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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