Variant report

Variant	rs766522
Chromosome Location	chr16:75424110-75424111
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:75296892..75301827-chr16:75422106..75426621,6	MCF-7	breast:

Variant related genes	Relation type
ENSG00000050820	Chromatin interaction

Extended variants
information (count: 230 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:221)

rs_ID	r²[population]
rs1011121	0.83[CHB][hapmap]
rs1017239	0.94[ASW][hapmap];0.90[CEU][hapmap];0.91[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MKK][hapmap];0.97[TSI][hapmap];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10431974	0.82[ASN][1000 genomes]
rs10514393	0.87[CHB][hapmap];0.87[JPT][hapmap]
rs10514396	0.83[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs1074961	0.98[ASN][1000 genomes]
rs10781976	0.83[CHB][hapmap]
rs10781977	0.90[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10871307	0.90[ASN][1000 genomes]
rs10871308	0.86[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10871311	0.81[ASN][1000 genomes]
rs1109341	0.82[ASN][1000 genomes]
rs1109342	0.83[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs11149812	1.00[CHB][hapmap];0.90[JPT][hapmap];0.88[ASN][1000 genomes]
rs11149813	0.89[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11149814	0.88[ASN][1000 genomes]
rs11149815	0.81[CHB][hapmap];0.88[JPT][hapmap]
rs11149816	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11149818	0.82[ASN][1000 genomes]
rs11149820	0.82[ASN][1000 genomes]
rs11149822	0.81[ASN][1000 genomes]
rs11149824	0.82[ASN][1000 genomes]
rs11149825	0.82[ASN][1000 genomes]
rs11149828	0.81[ASN][1000 genomes]
rs11149829	0.82[ASN][1000 genomes]
rs11149831	0.83[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs11640018	0.83[CHB][hapmap]
rs11640674	0.81[ASN][1000 genomes]
rs11641532	0.82[CHB][hapmap]
rs11643410	0.82[ASN][1000 genomes]
rs11644592	0.81[ASN][1000 genomes]
rs11645691	0.90[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.95[YRI][hapmap];0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11646418	0.94[ASN][1000 genomes]
rs11646677	0.83[CHB][hapmap];0.81[ASN][1000 genomes]
rs11858992	0.81[ASN][1000 genomes]
rs11860284	0.81[ASN][1000 genomes]
rs11862582	0.81[ASN][1000 genomes]
rs11864102	0.81[ASN][1000 genomes]
rs11865004	0.81[ASN][1000 genomes]
rs12051136	0.82[ASN][1000 genomes]
rs12051326	0.82[ASN][1000 genomes]
rs12149063	0.83[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs12443834	0.82[ASN][1000 genomes]
rs12443904	0.82[ASN][1000 genomes]
rs12444589	0.83[CHB][hapmap]
rs12445188	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12445211	0.91[ASN][1000 genomes]
rs12445813	0.90[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12446903	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12449177	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12599361	0.82[ASN][1000 genomes]
rs12922897	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12924782	0.81[ASN][1000 genomes]
rs12924920	0.81[ASN][1000 genomes]
rs12932952	0.95[ASN][1000 genomes]
rs12933281	0.82[CHB][hapmap]
rs12935329	0.95[ASN][1000 genomes]
rs1364078	0.82[CHB][hapmap];0.84[JPT][hapmap]
rs1364079	0.81[ASN][1000 genomes]
rs1540	0.84[ASN][1000 genomes]
rs1544810	0.81[ASN][1000 genomes]
rs1549306	0.83[CHB][hapmap];0.83[JPT][hapmap];0.80[ASN][1000 genomes]
rs1559339	0.83[CHB][hapmap]
rs17696696	0.83[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs17696749	0.83[CHB][hapmap]
rs1808434	0.81[ASN][1000 genomes]
rs1808435	0.81[ASN][1000 genomes]
rs1808436	0.81[ASN][1000 genomes]
rs185052	0.86[CHB][hapmap];0.90[JPT][hapmap];0.85[ASN][1000 genomes]
rs1862705	0.85[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1862706	0.82[JPT][hapmap]
rs1895489	0.86[ASN][1000 genomes]
rs1895490	0.83[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs2032926	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2059256	0.82[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs2059257	1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[JPT][hapmap];0.96[ASN][1000 genomes]
rs2113232	0.80[ASN][1000 genomes]
rs2161648	0.83[CHB][hapmap]
rs2161684	0.82[CHB][hapmap]
rs2242405	0.81[CEU][hapmap];0.91[CHB][hapmap];0.87[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.93[MEX][hapmap];0.97[TSI][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2285222	0.81[ASN][1000 genomes]
rs2285224	0.81[ASN][1000 genomes]
rs2285225	0.81[ASN][1000 genomes]
rs247423	0.96[ASN][1000 genomes]
rs247424	0.94[ASN][1000 genomes]
rs247425	0.95[ASN][1000 genomes]
rs247427	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];1.00[ASN][1000 genomes]
rs247431	1.00[ASN][1000 genomes]
rs247434	0.99[ASN][1000 genomes]
rs247436	1.00[ASN][1000 genomes]
rs247437	0.98[ASN][1000 genomes]
rs247438	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs247439	0.82[ASN][1000 genomes]
rs247443	0.85[ASN][1000 genomes]
rs247447	0.82[JPT][hapmap]
rs247450	0.82[ASN][1000 genomes]
rs2865527	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2865530	0.82[CHB][hapmap];0.83[JPT][hapmap];0.80[ASN][1000 genomes]
rs2865531	0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs2865532	0.90[ASN][1000 genomes]
rs2903033	0.82[CHB][hapmap];0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs34296964	0.81[ASN][1000 genomes]
rs35263058	0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs35552529	0.81[ASN][1000 genomes]
rs35737321	0.82[ASN][1000 genomes]
rs3743606	0.86[ASN][1000 genomes]
rs37588	0.82[ASN][1000 genomes]
rs37589	0.82[ASN][1000 genomes]
rs37602	0.86[CHB][hapmap];0.87[CHD][hapmap];0.91[JPT][hapmap]
rs3784936	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs3784937	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3844219	0.93[ASN][1000 genomes]
rs3851733	0.83[JPT][hapmap]
rs3851735	0.91[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs3851736	0.97[ASN][1000 genomes]
rs3851739	0.86[ASN][1000 genomes]
rs3863445	0.82[JPT][hapmap]
rs3863446	0.81[ASN][1000 genomes]
rs40217	0.85[ASN][1000 genomes]
rs4146809	0.83[CHB][hapmap];0.83[JPT][hapmap];0.80[ASN][1000 genomes]
rs4146810	0.83[CHB][hapmap];0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs4243111	0.83[CHB][hapmap]
rs42472	0.90[CHB][hapmap];0.85[JPT][hapmap];0.81[ASN][1000 genomes]
rs4536500	0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs455407	1.00[ASN][1000 genomes]
rs4638613	0.83[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs467223	0.99[ASN][1000 genomes]
rs467780	0.99[ASN][1000 genomes]
rs468079	0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4887813	0.86[ASN][1000 genomes]
rs4887814	0.88[ASN][1000 genomes]
rs4887823	0.82[CHB][hapmap];0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs4887824	0.83[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs4887828	0.89[CHB][hapmap];0.94[JPT][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4888374	0.88[ASN][1000 genomes]
rs4888375	0.88[ASN][1000 genomes]
rs4888376	0.83[CHB][hapmap]
rs4888377	0.84[CHB][hapmap]
rs4888378	0.83[CHB][hapmap]
rs4888379	0.83[CHB][hapmap];0.83[JPT][hapmap]
rs4888380	0.82[CHB][hapmap];0.83[JPT][hapmap]
rs4888381	0.94[ASN][1000 genomes]
rs4888383	0.83[CHB][hapmap];0.83[JPT][hapmap]
rs4888385	0.80[ASN][1000 genomes]
rs4888386	0.83[JPT][hapmap];0.80[ASN][1000 genomes]
rs4888387	0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs4888388	0.83[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs4888389	0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs4888393	1.00[CHB][hapmap];0.95[JPT][hapmap];0.99[ASN][1000 genomes]
rs4888394	0.99[ASN][1000 genomes]
rs4888395	0.99[ASN][1000 genomes]
rs4888396	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4888397	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4888398	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4888403	0.82[ASN][1000 genomes]
rs4888404	0.82[ASN][1000 genomes]
rs4888405	0.82[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs4888406	0.82[ASN][1000 genomes]
rs4888407	0.82[ASN][1000 genomes]
rs4888409	0.82[ASN][1000 genomes]
rs4888410	0.82[ASN][1000 genomes]
rs4888414	0.81[ASN][1000 genomes]
rs4888415	0.82[JPT][hapmap];0.81[ASN][1000 genomes]
rs4888416	0.83[CHB][hapmap];0.83[JPT][hapmap]
rs4888425	0.82[CHB][hapmap]
rs4888430	0.85[CHB][hapmap]
rs4993969	0.83[CHB][hapmap];0.81[ASN][1000 genomes]
rs4993970	0.81[ASN][1000 genomes]
rs4993971	1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.99[ASN][1000 genomes]
rs56343285	0.81[ASN][1000 genomes]
rs60730309	0.82[ASN][1000 genomes]
rs62062564	0.81[ASN][1000 genomes]
rs62062565	0.81[ASN][1000 genomes]
rs62062567	0.81[ASN][1000 genomes]
rs62062568	0.81[ASN][1000 genomes]
rs62062595	0.83[ASN][1000 genomes]
rs6564249	0.93[ASN][1000 genomes]
rs6564256	0.94[ASN][1000 genomes]
rs6564258	0.81[ASN][1000 genomes]
rs7184525	0.82[ASN][1000 genomes]
rs7185640	0.81[ASN][1000 genomes]
rs7188231	0.82[ASN][1000 genomes]
rs7188604	0.82[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs7189407	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7192155	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7199132	0.82[CHB][hapmap];0.81[JPT][hapmap];0.81[ASN][1000 genomes]
rs7199680	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7201989	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7202284	0.86[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7203157	0.83[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs7204984	0.82[CHB][hapmap]
rs7206541	0.81[ASN][1000 genomes]
rs72787160	0.82[ASN][1000 genomes]
rs7499872	0.82[ASN][1000 genomes]
rs766521	0.83[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs8046000	0.81[ASN][1000 genomes]
rs8046109	0.82[CHB][hapmap];0.83[JPT][hapmap]
rs8046184	0.99[ASN][1000 genomes]
rs8046416	0.81[CEU][hapmap];0.86[CHB][hapmap];0.87[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.93[MEX][hapmap];0.97[TSI][hapmap];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8046949	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8048527	0.82[ASN][1000 genomes]
rs8048677	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs8048816	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8049611	0.99[ASN][1000 genomes]
rs8050059	0.83[CHB][hapmap];0.83[JPT][hapmap]
rs8050662	0.91[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs8051407	0.82[ASN][1000 genomes]
rs8051611	0.97[ASN][1000 genomes]
rs8051785	0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8053632	0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs8054586	1.00[CHB][hapmap];0.95[JPT][hapmap];0.99[ASN][1000 genomes]
rs8055609	1.00[CHB][hapmap];0.95[JPT][hapmap];0.97[ASN][1000 genomes]
rs8056080	0.81[ASN][1000 genomes]
rs8056236	0.82[ASN][1000 genomes]
rs8057203	0.81[ASN][1000 genomes]
rs8057849	0.82[ASN][1000 genomes]
rs889446	0.90[CEU][hapmap];0.91[JPT][hapmap];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9922008	0.85[CHB][hapmap]
rs9933956	0.94[ASN][1000 genomes]
rs9934007	1.00[ASW][hapmap];0.90[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.93[MEX][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];0.95[YRI][hapmap];0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9989421	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916502	chr16:74845880-75732365	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	131 gene(s)	inside rSNPs	diseases
2	nsv931939	chr16:75261354-75765025	Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	nsv1065995	chr16:75373756-75626027	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	diseases
4	esv2422358	chr16:75381762-75456763	Weak transcription Genic enhancers Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
5	nsv1063718	chr16:75395969-75608071	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
6	nsv525232	chr16:75402361-75439132	Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
7	nsv525466	chr16:75402361-75439132	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
8	esv2758432	chr16:75419614-75576971	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
9	esv2758657	chr16:75419614-75576971	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs766522	CFDP1	Cis_1M	lymphoblastoid	RTeQTL
rs766522	CFDP1	cis	parietal	SCAN
rs766522	RFWD3	cis	cerebellum	SCAN

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:75338800-75426400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr16:75376600-75426800	Weak transcription	Brain Germinal Matrix	brain
3	chr16:75377000-75424400	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr16:75377000-75426400	Weak transcription	Gastric	stomach
5	chr16:75377400-75426400	Weak transcription	Pancreas	Pancrea
6	chr16:75399600-75426800	Weak transcription	Esophagus	oesophagus
7	chr16:75403600-75426800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr16:75406000-75453400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr16:75406600-75426400	Weak transcription	Psoas Muscle	Psoas
10	chr16:75407200-75454200	Weak transcription	Stomach Mucosa	stomach
11	chr16:75408400-75424600	Weak transcription	Fetal Brain Female	brain
12	chr16:75409200-75445400	Weak transcription	Colonic Mucosa	Colon
13	chr16:75412000-75425600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr16:75412000-75426000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr16:75412000-75426600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr16:75412000-75426800	Weak transcription	Spleen	Spleen
17	chr16:75412200-75424600	Weak transcription	Rectal Mucosa Donor 31	rectum
18	chr16:75412200-75426400	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr16:75412200-75426600	Weak transcription	Brain Angular Gyrus	brain
20	chr16:75412200-75426600	Weak transcription	Brain Cingulate Gyrus	brain
21	chr16:75412200-75428000	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr16:75412400-75425200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
23	chr16:75412400-75426600	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr16:75412600-75424600	Weak transcription	Placenta	Placenta
25	chr16:75412600-75426000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr16:75412600-75426800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr16:75412600-75446000	Weak transcription	Brain Substantia Nigra	brain
28	chr16:75412800-75424400	Weak transcription	Brain Anterior Caudate	brain
29	chr16:75412800-75424600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr16:75415200-75426400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr16:75415400-75426000	Weak transcription	Thymus	Thymus
32	chr16:75415400-75443200	Weak transcription	Small Intestine	intestine
33	chr16:75415600-75453400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
34	chr16:75415800-75424200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
35	chr16:75415800-75424400	Weak transcription	Primary neutrophils fromperipheralblood	blood
36	chr16:75416200-75424200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
37	chr16:75416800-75424200	Weak transcription	Skeletal Muscle Female	skeletal muscle
38	chr16:75416800-75426600	Weak transcription	NHDF-Ad	bronchial
39	chr16:75416800-75426800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
40	chr16:75417200-75424400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
41	chr16:75417400-75426600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
42	chr16:75417400-75426600	Weak transcription	HMEC	breast
43	chr16:75419000-75424200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
44	chr16:75419400-75424200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr16:75419600-75424200	Weak transcription	Primary hematopoietic stem cells	blood
46	chr16:75419600-75424400	Weak transcription	Osteobl	bone
47	chr16:75419600-75424600	Weak transcription	Hela-S3	cervix
48	chr16:75419600-75426400	Weak transcription	HUVEC	blood vessel
49	chr16:75419600-75426600	Weak transcription	Muscle Satellite Cultured Cells	--
50	chr16:75420000-75426600	Weak transcription	A549	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links