Variant report

Variant	rs7670989
Chromosome Location	chr4:77166624-77166625
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1583942	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17001352	1.00[AMR][1000 genomes]
rs17001358	1.00[AMR][1000 genomes]
rs17001550	1.00[AMR][1000 genomes]
rs17001653	1.00[AMR][1000 genomes]
rs17001718	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17001742	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17001751	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2083654	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55680121	1.00[AMR][1000 genomes]
rs56235958	1.00[AMR][1000 genomes]
rs56693549	1.00[AMR][1000 genomes]
rs57573839	1.00[AMR][1000 genomes]
rs59732112	1.00[AMR][1000 genomes]
rs73825884	1.00[AMR][1000 genomes]
rs73826326	1.00[AMR][1000 genomes]
rs73826328	1.00[AMR][1000 genomes]
rs73826329	1.00[AMR][1000 genomes]
rs73826330	1.00[AMR][1000 genomes]
rs73826331	1.00[AMR][1000 genomes]
rs73826332	1.00[AMR][1000 genomes]
rs73826360	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760851	chr4:77164549-77185144	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:77166200-77167600	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr4:77166400-77167000	Enhancers	Psoas Muscle	Psoas
3	chr4:77166600-77167000	Enhancers	Brain Angular Gyrus	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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