Variant report

Variant	rs7687335
Chromosome Location	chr4:127447965-127447966
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10518497	0.84[EUR][1000 genomes]
rs11098881	0.86[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs11098882	0.86[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs12650060	0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12651617	0.84[EUR][1000 genomes]
rs17011254	0.84[EUR][1000 genomes]
rs28558216	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56358919	0.93[ASN][1000 genomes]
rs57902647	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs58806415	0.84[EUR][1000 genomes]
rs59803623	0.84[EUR][1000 genomes]
rs59819551	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60596580	0.84[EUR][1000 genomes]
rs60752116	0.84[EUR][1000 genomes]
rs61359035	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7687529	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7687807	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7687848	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7691736	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv595385	chr4:127383473-127451806	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127447200-127448400	ZNF genes & repeats	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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