Variant report

Variant	rs60596580
Chromosome Location	chr4:127461364-127461365
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10518497	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11098886	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12651617	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1511139	0.85[AMR][1000 genomes]
rs1511141	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1511142	0.82[AMR][1000 genomes]
rs17011254	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2221682	0.98[ASN][1000 genomes]
rs58806415	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59803623	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59819551	0.84[EUR][1000 genomes]
rs60752116	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6829686	0.92[AMR][1000 genomes]
rs7687335	0.84[EUR][1000 genomes]
rs7687529	0.84[EUR][1000 genomes]
rs7687807	0.84[EUR][1000 genomes]
rs7687848	0.84[EUR][1000 genomes]
rs7691736	0.84[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127459600-127466800	Weak transcription	K562	blood
2	chr4:127460600-127463200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links