Variant report

Variant	rs7695600
Chromosome Location	chr4:125698090-125698091
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10034605	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2135479	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2174623	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4000844	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4321650	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6816273	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6823943	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6838625	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7661684	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7674739	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9307548	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs974268	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9884327	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs993705	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879882	chr4:125662969-125703938	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:125698000-125698800	Weak transcription	Aorta	Aorta
2	chr4:125698000-125699400	Enhancers	Muscle Satellite Cultured Cells	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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