Variant report

Variant	rs7712093
Chromosome Location	chr5:29850762-29850763
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10045422	1.00[CEU][hapmap];0.96[YRI][hapmap]
rs10059223	0.85[ASN][1000 genomes]
rs10068185	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12697229	0.91[CEU][hapmap];0.83[CHB][hapmap];0.88[GIH][hapmap];0.90[JPT][hapmap];0.94[MEX][hapmap];0.91[TSI][hapmap]
rs1456644	0.81[ASN][1000 genomes]
rs1582928	0.96[CEU][hapmap];0.82[CHB][hapmap]
rs2115185	0.81[ASN][1000 genomes]
rs2288448	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4597986	0.94[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap]
rs4867227	0.91[CEU][hapmap];0.82[CHB][hapmap]
rs7709002	0.86[ASN][1000 genomes]
rs7730825	0.83[CHB][hapmap];0.84[MEX][hapmap]
rs9292347	0.96[CEU][hapmap];0.85[GIH][hapmap];0.95[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3385368	chr5:29548608-29910057	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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