Variant report

Variant	rs77150451
Chromosome Location	chr9:86518136-86518137
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv469859	chr9:86398152-86587957	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv482641	chr9:86398152-86587957	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
3	esv2758192	chr9:86414024-86603602	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
4	esv2759701	chr9:86414024-86603602	Enhancers Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
5	nsv8541	chr9:86469723-86593758	Flanking Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
6	nsv438108	chr9:86488586-86542206	Active TSS Flanking Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	16 gene(s)	inside rSNPs	diseases
7	nsv968713	chr9:86517820-86522655	Weak transcription Enhancers Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:46 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:86460600-86518200	Weak transcription	Thymus	Thymus
2	chr9:86461600-86535400	Weak transcription	Fetal Intestine Small	intestine
3	chr9:86461600-86535400	Weak transcription	Ovary	ovary
4	chr9:86462200-86535200	Weak transcription	Fetal Brain Female	brain
5	chr9:86462600-86535200	Weak transcription	Brain Anterior Caudate	brain
6	chr9:86481000-86535800	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr9:86491000-86535200	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr9:86491200-86535200	Weak transcription	Primary hematopoietic stem cells	blood
9	chr9:86491800-86518200	Weak transcription	Primary B cells from cord blood	blood
10	chr9:86496000-86535000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr9:86496400-86533000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr9:86499400-86518200	Weak transcription	Fetal Muscle Leg	muscle
13	chr9:86499400-86535000	Weak transcription	Fetal Kidney	kidney
14	chr9:86499800-86523200	Weak transcription	Fetal Thymus	thymus
15	chr9:86500000-86534800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr9:86500200-86521200	Weak transcription	Adipose Nuclei	Adipose
17	chr9:86500200-86521200	Weak transcription	Skeletal Muscle Male	skeletal muscle
18	chr9:86500200-86535200	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr9:86500200-86535200	Weak transcription	Stomach Smooth Muscle	stomach
20	chr9:86500200-86535600	Weak transcription	Lung	lung
21	chr9:86501200-86521600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr9:86502000-86532400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr9:86502600-86535000	Weak transcription	Fetal Lung	lung
24	chr9:86506400-86534800	Weak transcription	Pancreas	Pancrea
25	chr9:86508200-86518400	Weak transcription	Aorta	Aorta
26	chr9:86508200-86535600	Weak transcription	Esophagus	oesophagus
27	chr9:86508400-86520200	Weak transcription	Liver	Liver
28	chr9:86509000-86521200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
29	chr9:86512400-86535400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr9:86512600-86535400	Weak transcription	Placenta	Placenta
31	chr9:86513200-86534800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr9:86513800-86519000	Weak transcription	Muscle Satellite Cultured Cells	--
33	chr9:86516200-86521400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
34	chr9:86516200-86535000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr9:86517000-86519800	Weak transcription	Brain Cingulate Gyrus	brain
36	chr9:86517400-86535200	Weak transcription	Primary B cells from peripheral blood	blood
37	chr9:86517600-86535000	Weak transcription	Cortex derived primary cultured neurospheres	brain
38	chr9:86518000-86518200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr9:86518000-86518200	ZNF genes & repeats	Spleen	Spleen
40	chr9:86518000-86518800	Strong transcription	Primary T cells from cord blood	blood
41	chr9:86518000-86518800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr9:86518000-86518800	Strong transcription	Fetal Intestine Large	intestine
43	chr9:86518000-86518800	Strong transcription	Left Ventricle	heart
44	chr9:86518000-86519000	Strong transcription	Fetal Stomach	stomach
45	chr9:86518000-86519400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr9:86518000-86520000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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