Variant report

Variant	rs7730200
Chromosome Location	chr5:57770365-57770366
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10076546	0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10471452	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1508918	0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1508919	0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2098702	0.85[ASN][1000 genomes]
rs2216691	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2662619	0.81[AMR][1000 genomes]
rs3211270	0.81[ASN][1000 genomes]
rs4699927	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4700293	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7723549	0.91[AMR][1000 genomes]
rs7726165	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7729581	0.82[AMR][1000 genomes]
rs7729588	0.83[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57763000-57771000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr5:57770200-57770600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr5:57770200-57772400	Weak transcription	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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