Variant report

Variant	rs7736530
Chromosome Location	chr5:167520826-167520827
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10073793	0.82[CHB][hapmap];1.00[CHD][hapmap]
rs11960195	0.87[EUR][1000 genomes]
rs1469678	1.00[CHB][hapmap]
rs1529682	0.82[CHB][hapmap];1.00[CHD][hapmap]
rs17069810	0.80[MEX][hapmap]
rs17069915	0.82[CHB][hapmap]
rs17531616	1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.85[MEX][hapmap];0.97[MKK][hapmap];0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17550124	1.00[CHB][hapmap]
rs2116763	0.82[CHB][hapmap];1.00[CHD][hapmap]
rs2569053	0.82[CHB][hapmap]
rs2617972	0.82[CHB][hapmap];1.00[CHD][hapmap]
rs3101759	1.00[CHB][hapmap]
rs62383401	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6555784	1.00[CHB][hapmap]
rs968547	0.82[CHB][hapmap]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167513800-167536000	Weak transcription	NHDF-Ad	bronchial
2	chr5:167514000-167531200	Weak transcription	HSMMtube	muscle
3	chr5:167514200-167524400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr5:167514200-167531400	Weak transcription	HSMM	muscle
5	chr5:167516200-167538400	Weak transcription	HMEC	breast
6	chr5:167516600-167532000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr5:167517400-167522400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr5:167517400-167529200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr5:167517400-167539400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr5:167517600-167521800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
11	chr5:167517600-167523000	Strong transcription	NHEK	skin
12	chr5:167519200-167534800	Weak transcription	Esophagus	oesophagus
13	chr5:167519400-167521800	Enhancers	Hela-S3	cervix
14	chr5:167519600-167521400	Enhancers	Adipose Nuclei	Adipose
15	chr5:167519800-167521200	Enhancers	Fetal Kidney	kidney
16	chr5:167519800-167522000	Enhancers	Ovary	ovary
17	chr5:167520000-167521200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr5:167520000-167521600	Enhancers	Fetal Lung	lung
19	chr5:167520000-167524800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr5:167520200-167521200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr5:167520200-167521200	Weak transcription	Right Ventricle	heart
22	chr5:167520400-167521000	Weak transcription	Left Ventricle	heart
23	chr5:167520400-167521200	Enhancers	Muscle Satellite Cultured Cells	--
24	chr5:167520600-167526200	Weak transcription	Fetal Heart	heart

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