Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:57166262..57168451-chr6:57170162..57172445,2	K562	blood:
2	chr6:57164742..57166787-chr6:57167425..57169539,2	K562	blood:

rSNPs within LD-proxies of this variant (count:4)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv491933	chr6:56177722-57171010	Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
2	nsv934026	chr6:56382056-57184218	Flanking Bivalent TSS/Enh Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
3	nsv533050	chr6:56504480-57297586	Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:57163800-57168800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr6:57164200-57171600	Enhancers	Rectal Smooth Muscle	rectum
3	chr6:57165400-57169400	Weak transcription	Fetal Muscle Leg	muscle
4	chr6:57166400-57168800	Enhancers	Stomach Smooth Muscle	stomach
5	chr6:57167000-57168800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr6:57167200-57168800	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr6:57167200-57169400	Enhancers	Muscle Satellite Cultured Cells	--
8	chr6:57167600-57168600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr6:57167600-57168600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr6:57167600-57168800	Weak transcription	Osteobl	bone
11	chr6:57167600-57169400	Weak transcription	Fetal Lung	lung
12	chr6:57167600-57169600	Weak transcription	Fetal Kidney	kidney
13	chr6:57168000-57170600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr6:57168200-57168600	Weak transcription	Colon Smooth Muscle	Colon
15	chr6:57168200-57169800	Enhancers	NHDF-Ad	bronchial
16	chr6:57168200-57170200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr6:57168200-57171600	Enhancers	Fetal Stomach	stomach
18	chr6:57168400-57169600	Enhancers	Fetal Muscle Trunk	muscle
19	chr6:57168400-57170200	Enhancers	Ovary	ovary
20	chr6:57168400-57171800	Enhancers	NHLF	lung

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