Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:24316198..24318922-chr6:24321457..24323434,2	MCF-7	breast:
2	chr6:24314909..24317500-chr6:24318637..24321467,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10456303	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10456304	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12192603	0.86[CHD][hapmap]
rs12192947	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12206452	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12207932	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12207989	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12211069	0.80[EUR][1000 genomes]
rs12213122	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1417411	0.97[ASN][1000 genomes]
rs1935033	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2153657	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4269365	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4599626	0.89[CHD][hapmap]
rs55937934	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6904234	0.85[JPT][hapmap]
rs6904343	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73726651	0.84[AFR][1000 genomes]
rs73726652	0.85[AFR][1000 genomes]
rs7771394	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9356933	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9366567	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9467110	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs7741108	HFE	cis	parietal	SCAN
rs7741108	MRS2L	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24314200-24321600	Weak transcription	Fetal Heart	heart
2	chr6:24314400-24321800	Weak transcription	NH-A	brain
3	chr6:24315000-24319600	Weak transcription	Fetal Kidney	kidney
4	chr6:24316400-24326800	Weak transcription	Pancreas	Pancrea
5	chr6:24316600-24317000	Enhancers	HepG2	liver
6	chr6:24316600-24321400	Weak transcription	HSMMtube	muscle
7	chr6:24316600-24324800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr6:24316800-24317000	Enhancers	A549	lung

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