Variant report

Variant	rs73726652
Chromosome Location	chr6:24316404-24316405
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10456301	0.85[EUR][1000 genomes]
rs10456303	0.83[AFR][1000 genomes]
rs12192947	0.83[AFR][1000 genomes]
rs12196797	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12196880	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12198320	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12206452	0.82[AFR][1000 genomes]
rs12207932	0.82[AFR][1000 genomes]
rs12207989	0.82[AFR][1000 genomes]
rs12214822	0.85[EUR][1000 genomes]
rs16889058	0.87[EUR][1000 genomes]
rs16889069	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55937934	0.82[AFR][1000 genomes]
rs57500180	0.89[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs6904343	0.83[AFR][1000 genomes]
rs73726645	0.92[EUR][1000 genomes]
rs73726651	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7741108	0.85[AFR][1000 genomes]
rs7763196	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24314200-24321600	Weak transcription	Fetal Heart	heart
2	chr6:24314400-24321800	Weak transcription	NH-A	brain
3	chr6:24315000-24319600	Weak transcription	Fetal Kidney	kidney
4	chr6:24316000-24316600	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr6:24316000-24316600	Genic enhancers	HepG2	liver
6	chr6:24316200-24316600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr6:24316200-24316600	Enhancers	HSMMtube	muscle
8	chr6:24316400-24316600	Enhancers	HSMM	muscle
9	chr6:24316400-24316800	Flanking Active TSS	A549	lung
10	chr6:24316400-24326800	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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