Variant report

Variant	rs57500180
Chromosome Location	chr6:24316682-24316683
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs12196797	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12196880	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12198320	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16889069	0.89[ASN][1000 genomes]
rs73726651	0.89[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs73726652	0.89[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7763196	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24314200-24321600	Weak transcription	Fetal Heart	heart
2	chr6:24314400-24321800	Weak transcription	NH-A	brain
3	chr6:24315000-24319600	Weak transcription	Fetal Kidney	kidney
4	chr6:24316400-24316800	Flanking Active TSS	A549	lung
5	chr6:24316400-24326800	Weak transcription	Pancreas	Pancrea
6	chr6:24316600-24317000	Enhancers	HepG2	liver
7	chr6:24316600-24321400	Weak transcription	HSMMtube	muscle
8	chr6:24316600-24324800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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