Variant report

Variant rs12198320
Chromosome Location chr6:24313828-24313829
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24312200-24314000 Weak transcription HSMMtube muscle
2 chr6:24312600-24314000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:24312800-24314200 Enhancers ES-WA7 Cell Line embryonic stem cell
4 chr6:24312800-24314200 Enhancers iPS-18 Cell Line embryonic stem cell
5 chr6:24312800-24314400 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr6:24312800-24314400 Enhancers NH-A brain
7 chr6:24313000-24314000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr6:24313000-24314400 Enhancers HUES48 Cell Line embryonic stem cell
9 chr6:24313400-24314000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr6:24313400-24314200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr6:24313400-24314200 Enhancers Fetal Heart heart
12 chr6:24313400-24314400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr6:24313400-24314400 Enhancers NHEK skin
14 chr6:24313600-24314000 Active TSS A549 lung
15 chr6:24313600-24314200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr6:24313600-24314200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr6:24313600-24314200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
18 chr6:24313600-24314200 Enhancers Cortex derived primary cultured neurospheres brain
19 chr6:24313600-24314200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr6:24313600-24314200 Enhancers Fetal Brain Male brain
21 chr6:24313600-24314200 Enhancers Hela-S3 cervix
22 chr6:24313600-24314400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:24313600-24314400 Enhancers Fetal Intestine Large intestine
24 chr6:24313800-24314200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
25 chr6:24313800-24314200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
26 chr6:24313800-24314200 Flanking Active TSS HUES64 Cell Line embryonic stem cell
27 chr6:24313800-24314200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
28 chr6:24313800-24314200 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr6:24313800-24314200 Enhancers Liver Liver
30 chr6:24313800-24314200 Enhancers Fetal Intestine Small intestine
31 chr6:24313800-24314200 Enhancers Fetal Lung lung
32 chr6:24313800-24314200 Enhancers Fetal Muscle Leg muscle
33 chr6:24313800-24314200 Enhancers Placenta Placenta
34 chr6:24313800-24314200 Enhancers Gastric stomach
35 chr6:24313800-24314200 Enhancers HSMM muscle
36 chr6:24313800-24314200 Enhancers Osteobl bone
37 chr6:24313800-24314400 Enhancers H1 Cell Line embryonic stem cell
38 chr6:24313800-24314400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr6:24313800-24314400 Flanking Active TSS Fetal Kidney kidney
40 chr6:24313800-24314400 Enhancers Ovary ovary
41 chr6:24313800-24314400 Enhancers Pancreas Pancrea
42 chr6:24313800-24314400 Flanking Active TSS HepG2 liver
43 chr6:24313800-24314400 Enhancers HMEC breast
44 chr6:24313800-24314600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell

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