Variant report

Variant rs12196880
Chromosome Location chr6:24313747-24313748
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24308400-24313800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr6:24312000-24313800 Enhancers ES-I3 Cell Line embryonic stem cell
3 chr6:24312200-24313800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr6:24312200-24314000 Weak transcription HSMMtube muscle
5 chr6:24312400-24313800 Enhancers HUES6 Cell Line embryonic stem cell
6 chr6:24312600-24313800 Weak transcription H1 Cell Line embryonic stem cell
7 chr6:24312600-24313800 Weak transcription Fetal Intestine Small intestine
8 chr6:24312600-24314000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr6:24312800-24313800 Enhancers HepG2 liver
10 chr6:24312800-24314200 Enhancers ES-WA7 Cell Line embryonic stem cell
11 chr6:24312800-24314200 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr6:24312800-24314400 Enhancers iPS-15b Cell Line embryonic stem cell
13 chr6:24312800-24314400 Enhancers NH-A brain
14 chr6:24313000-24313800 Enhancers HUES64 Cell Line embryonic stem cell
15 chr6:24313000-24314000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr6:24313000-24314400 Enhancers HUES48 Cell Line embryonic stem cell
17 chr6:24313400-24313800 Weak transcription HSMM muscle
18 chr6:24313400-24314000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr6:24313400-24314200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr6:24313400-24314200 Enhancers Fetal Heart heart
21 chr6:24313400-24314400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr6:24313400-24314400 Enhancers NHEK skin
23 chr6:24313600-24313800 Active TSS Fetal Kidney kidney
24 chr6:24313600-24314000 Active TSS A549 lung
25 chr6:24313600-24314200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:24313600-24314200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr6:24313600-24314200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
28 chr6:24313600-24314200 Enhancers Cortex derived primary cultured neurospheres brain
29 chr6:24313600-24314200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr6:24313600-24314200 Enhancers Fetal Brain Male brain
31 chr6:24313600-24314200 Enhancers Hela-S3 cervix
32 chr6:24313600-24314400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr6:24313600-24314400 Enhancers Fetal Intestine Large intestine

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