The 2.0 version of rSNPBase

Variant report

Variant rs7743230
Chromosome Location chr6:72077070-72077071
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:72031600-72077400 Weak transcription Pancreas Pancrea
2 chr6:72060000-72077200 Weak transcription NHEK skin
3 chr6:72060800-72077400 Weak transcription Right Ventricle heart
4 chr6:72061200-72077200 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr6:72061600-72097000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr6:72061800-72077200 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr6:72068600-72077400 Weak transcription Psoas Muscle Psoas
8 chr6:72070200-72081400 Weak transcription Hela-S3 cervix
9 chr6:72070800-72077200 Weak transcription Lung lung
10 chr6:72071400-72077200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr6:72071400-72077800 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr6:72071400-72085200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr6:72071600-72077400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr6:72071600-72083600 Weak transcription Placenta Placenta
15 chr6:72072600-72077400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr6:72074000-72077600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr6:72074000-72077600 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr6:72074600-72078200 Enhancers Primary hematopoietic stem cells blood
19 chr6:72074800-72077600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr6:72074800-72078600 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr6:72075200-72077200 Enhancers Duodenum Smooth Muscle Duodenum
22 chr6:72075200-72077800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr6:72075200-72078000 Enhancers NHLF lung
24 chr6:72075400-72077800 Enhancers Primary B cells from peripheral blood blood
25 chr6:72075400-72087200 Weak transcription Fetal Heart heart
26 chr6:72075800-72077800 Enhancers GM12878-XiMat blood
27 chr6:72076000-72077200 Strong transcription HSMM muscle
28 chr6:72076000-72078000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:72076000-72078200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr6:72076000-72083800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:72076000-72084000 Weak transcription Fetal Intestine Small intestine
32 chr6:72076000-72093400 Weak transcription Brain Hippocampus Middle brain
33 chr6:72076200-72077200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr6:72076200-72077200 Weak transcription A549 lung
35 chr6:72076200-72077400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr6:72076200-72077800 Weak transcription HSMMtube muscle
37 chr6:72076200-72078200 Enhancers HUVEC blood vessel
38 chr6:72076200-72083800 Weak transcription NH-A brain
39 chr6:72076200-72103200 Weak transcription Aorta Aorta
40 chr6:72076400-72077400 Strong transcription Fetal Kidney kidney
41 chr6:72076600-72077400 Enhancers Left Ventricle heart
42 chr6:72076600-72077600 Enhancers Primary B cells from cord blood blood
43 chr6:72076600-72077600 Weak transcription Muscle Satellite Cultured Cells --
44 chr6:72076600-72078600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr6:72076600-72080200 Weak transcription Osteobl bone
46 chr6:72076600-72080400 Weak transcription Liver Liver
47 chr6:72076600-72081000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr6:72076600-72081000 Weak transcription Fetal Lung lung
49 chr6:72076600-72083400 Weak transcription Adipose Nuclei Adipose
50 chr6:72076600-72087600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015