Variant report

Variant	rs7743362
Chromosome Location	chr6:50078806-50078807
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10948541	0.87[CEU][hapmap];0.88[EUR][1000 genomes]
rs12190383	0.99[EUR][1000 genomes]
rs12196609	1.00[CEU][hapmap];1.00[GIH][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap]
rs12197351	0.83[EUR][1000 genomes]
rs12197933	1.00[CEU][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12208674	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap]
rs12208740	1.00[CEU][hapmap];1.00[GIH][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap]
rs12213027	1.00[CEU][hapmap];0.89[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs6929062	1.00[CEU][hapmap]
rs6931140	0.80[EUR][1000 genomes]
rs72864882	0.82[EUR][1000 genomes]
rs7759575	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7743362	ICK	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:50078800-50079000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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