No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
nsv817248 |
chr9:706283-1457665 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
23 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv1016321 |
chr9:1034594-1592366 |
Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv539908 |
chr9:1034594-1592366 |
Bivalent Enhancer Bivalent/Poised TSS Weak transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
4 |
esv2758176 |
chr9:1055347-1529128 |
Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
5 |
esv2759656 |
chr9:1055347-1529128 |
Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
6 |
esv2752273 |
chr9:1062218-1824888 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
7 |
nsv1026043 |
chr9:1079462-1732502 |
Active TSS Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
8 |
nsv539909 |
chr9:1079462-1732502 |
Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
9 |
esv2757301 |
chr9:1183321-1413700 |
Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
10 |
esv34351 |
chr9:1184213-1413700 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
11 |
nsv1031506 |
chr9:1216007-1472056 |
Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
12 |
nsv613052 |
chr9:1311310-1662585 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
13 |
nsv1031422 |
chr9:1318383-1716944 |
Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
14 |
nsv539912 |
chr9:1318383-1716944 |
Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
15 |
nsv1032384 |
chr9:1320386-1719409 |
Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
16 |
nsv539913 |
chr9:1320386-1719409 |
Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
17 |
nsv892022 |
chr9:1341674-1428059 |
Enhancers Weak transcription
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
18 |
nsv1031347 |
chr9:1367852-1472056 |
Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
19 |
nsv1024765 |
chr9:1367852-1475882 |
Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
20 |
nsv1025668 |
chr9:1370846-1473093 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
21 |
nsv1021447 |
chr9:1374455-1439920 |
Weak transcription Enhancers Flanking Active TSS Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
22 |
nsv1024419 |
chr9:1378131-1418670 |
Enhancers Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
23 |
nsv892023 |
chr9:1382861-1468923 |
Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
24 |
nsv892024 |
chr9:1413540-1503356 |
Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|