The 2.0 version of rSNPBase

Variant report

Variant rs775233
Chromosome Location chr3:113035481-113035482
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112990400-113036000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr3:112993800-113036000 Weak transcription Right Ventricle heart
3 chr3:112995400-113035800 Weak transcription Lung lung
4 chr3:112995800-113035800 Weak transcription Thymus Thymus
5 chr3:112996400-113046400 Weak transcription Duodenum Mucosa Duodenum
6 chr3:112997200-113036200 Weak transcription Spleen Spleen
7 chr3:112998600-113036000 Weak transcription Gastric stomach
8 chr3:113001200-113044600 Weak transcription Fetal Kidney kidney
9 chr3:113006200-113036000 Weak transcription Pancreas Pancrea
10 chr3:113007200-113043400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr3:113008200-113035800 Weak transcription Fetal Intestine Small intestine
12 chr3:113010800-113035800 Weak transcription Ovary ovary
13 chr3:113011000-113036000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr3:113013600-113065200 Weak transcription Left Ventricle heart
15 chr3:113017800-113036000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr3:113020800-113041200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr3:113022600-113035800 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr3:113023400-113041600 Weak transcription Brain Hippocampus Middle brain
19 chr3:113024200-113038000 Weak transcription Colonic Mucosa Colon
20 chr3:113024600-113046600 Weak transcription Muscle Satellite Cultured Cells --
21 chr3:113024600-113081000 Weak transcription Stomach Smooth Muscle stomach
22 chr3:113028600-113053400 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr3:113030000-113036000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr3:113031600-113035800 Weak transcription Fetal Stomach stomach
25 chr3:113032800-113038600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr3:113034000-113036600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr3:113034000-113037000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr3:113034200-113037000 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr3:113034400-113046800 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr3:113034600-113036000 ZNF genes & repeats Primary hematopoietic stem cells blood
31 chr3:113034800-113035800 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr3:113034800-113036000 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr3:113034800-113036200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr3:113034800-113044600 Weak transcription Liver Liver
35 chr3:113034800-113044600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr3:113034800-113044800 Weak transcription A549 lung
37 chr3:113034800-113048400 Weak transcription Fetal Lung lung
38 chr3:113034800-113053600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr3:113034800-113054000 Weak transcription Psoas Muscle Psoas
40 chr3:113035000-113035600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr3:113035000-113035800 Weak transcription Brain Anterior Caudate brain
42 chr3:113035000-113035800 Strong transcription Colon Smooth Muscle Colon
43 chr3:113035000-113035800 Weak transcription Fetal Intestine Large intestine
44 chr3:113035000-113036800 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr3:113035000-113036800 Strong transcription Primary T cells from cord blood blood
46 chr3:113035000-113040800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr3:113035000-113044600 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr3:113035000-113050800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr3:113035000-113052000 Weak transcription HSMMtube muscle
50 chr3:113035000-113053000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015