Variant report

Variant rs7754564
Chromosome Location chr6:1725301-1725302
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:1695400-1729400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr6:1695800-1731400 Weak transcription Fetal Intestine Large intestine
3 chr6:1701200-1749400 Weak transcription Colonic Mucosa Colon
4 chr6:1706800-1726800 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr6:1713400-1726000 Weak transcription Dnd41 blood
6 chr6:1716000-1749200 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr6:1716600-1728200 Weak transcription Liver Liver
8 chr6:1717000-1726200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:1717600-1731600 Weak transcription Aorta Aorta
10 chr6:1718800-1731400 Weak transcription Primary hematopoietic stem cells blood
11 chr6:1719800-1725800 Weak transcription Fetal Intestine Small intestine
12 chr6:1721200-1731600 Weak transcription Right Atrium heart
13 chr6:1721200-1746200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr6:1721200-1748800 Weak transcription Osteobl bone
15 chr6:1721400-1730600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr6:1721400-1739400 Weak transcription Hela-S3 cervix
17 chr6:1721600-1726600 Weak transcription Brain Substantia Nigra brain
18 chr6:1721800-1728600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr6:1722000-1729400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr6:1722200-1725400 Weak transcription Brain Hippocampus Middle brain
21 chr6:1722200-1727800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr6:1722800-1725600 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr6:1723000-1727600 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr6:1723000-1743200 Strong transcription HepG2 liver
25 chr6:1723800-1726800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr6:1724000-1725400 Enhancers iPS-20b Cell Line embryonic stem cell
27 chr6:1724000-1725400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr6:1724000-1725600 Enhancers HMEC breast
29 chr6:1724000-1725800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:1724000-1726800 Enhancers HUES6 Cell Line embryonic stem cell
31 chr6:1724000-1728000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr6:1724200-1725400 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr6:1724200-1725400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr6:1724200-1725400 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr6:1724200-1725400 Enhancers Fetal Lung lung
36 chr6:1724200-1725600 Enhancers HUES64 Cell Line embryonic stem cell
37 chr6:1724200-1725600 Enhancers Fetal Kidney kidney
38 chr6:1724200-1725600 Enhancers NHEK skin
39 chr6:1724200-1727000 Strong transcription Primary T cells from cord blood blood
40 chr6:1724400-1725400 Enhancers iPS-15b Cell Line embryonic stem cell
41 chr6:1724400-1725400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr6:1724400-1725600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr6:1724400-1725600 Enhancers Rectal Mucosa Donor 31 rectum
44 chr6:1724400-1725600 Enhancers HUVEC blood vessel
45 chr6:1724400-1725600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
46 chr6:1724400-1726800 Strong transcription Duodenum Mucosa Duodenum
47 chr6:1724600-1725400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr6:1724800-1725400 Genic enhancers Primary B cells from peripheral blood blood
49 chr6:1724800-1725400 Enhancers Stomach Mucosa stomach
50 chr6:1724800-1725800 Flanking Active TSS Primary neutrophils fromperipheralblood blood

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