Variant report

Variant	rs7763090
Chromosome Location	chr6:12255469-12255470
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10478703	1.00[EUR][1000 genomes]
rs219967	1.00[EUR][1000 genomes]
rs219968	1.00[EUR][1000 genomes]
rs6905883	1.00[EUR][1000 genomes]
rs73369214	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830586	chr6:12130076-12295334	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:12247400-12260600	Weak transcription	A549	lung
2	chr6:12254800-12255600	Weak transcription	Duodenum Mucosa	Duodenum
3	chr6:12254800-12260800	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr6:12255400-12256000	Enhancers	Fetal Intestine Large	intestine
5	chr6:12255400-12256400	Enhancers	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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