The 2.0 version of rSNPBase

Variant report

Variant rs7769902
Chromosome Location chr6:46110821-46110822
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:46098800-46111600 Weak transcription Right Ventricle heart
2 chr6:46098800-46112400 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr6:46098800-46112800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr6:46098800-46112800 Weak transcription Rectal Smooth Muscle rectum
5 chr6:46098800-46112800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr6:46098800-46113000 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr6:46098800-46117800 Weak transcription Gastric stomach
8 chr6:46098800-46129000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr6:46101600-46111800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr6:46101600-46112000 Weak transcription Stomach Smooth Muscle stomach
11 chr6:46101800-46112000 Weak transcription Colon Smooth Muscle Colon
12 chr6:46101800-46113000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr6:46102200-46113000 Weak transcription Fetal Intestine Large intestine
14 chr6:46105000-46114600 Weak transcription Fetal Muscle Leg muscle
15 chr6:46105400-46115000 Weak transcription Aorta Aorta
16 chr6:46105400-46133800 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr6:46105600-46113200 Weak transcription Spleen Spleen
18 chr6:46105600-46128600 Weak transcription Brain Angular Gyrus brain
19 chr6:46105600-46137400 Weak transcription Brain Inferior Temporal Lobe brain
20 chr6:46105800-46112800 Weak transcription HSMMtube muscle
21 chr6:46106400-46111000 Weak transcription Primary monocytes fromperipheralblood blood
22 chr6:46106400-46111600 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr6:46106400-46112600 Weak transcription Brain Cingulate Gyrus brain
24 chr6:46106400-46112800 Weak transcription Brain Hippocampus Middle brain
25 chr6:46106400-46125400 Weak transcription Psoas Muscle Psoas
26 chr6:46106400-46138000 Weak transcription Lung lung
27 chr6:46106600-46111200 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr6:46106600-46112800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr6:46106600-46112800 Weak transcription Liver Liver
30 chr6:46107600-46111400 Strong transcription Primary T cells fromperipheralblood blood
31 chr6:46107800-46114000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr6:46108000-46130000 Weak transcription Brain Substantia Nigra brain
33 chr6:46108800-46112600 Weak transcription Ovary ovary
34 chr6:46109000-46111200 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr6:46109200-46111400 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr6:46109200-46111600 Enhancers iPS-18 Cell Line embryonic stem cell
37 chr6:46109200-46111800 Strong transcription Primary B cells from peripheral blood blood
38 chr6:46109600-46111200 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr6:46109600-46111600 Strong transcription Fetal Thymus thymus
40 chr6:46109600-46112400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr6:46109800-46112000 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr6:46109800-46112400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr6:46110000-46111000 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr6:46110200-46111400 Strong transcription Primary T cells from cord blood blood
45 chr6:46110200-46111400 Strong transcription Primary hematopoietic stem cells blood
46 chr6:46110200-46112400 Enhancers Primary neutrophils fromperipheralblood blood
47 chr6:46110400-46111400 Strong transcription Primary T killer naive cells fromperipheralblood blood
48 chr6:46110400-46111600 Strong transcription Primary B cells from cord blood blood
49 chr6:46110400-46111600 Strong transcription Rectal Mucosa Donor 31 rectum
50 chr6:46110400-46112000 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015